|
Putative Rhodobacter capsulatus B6 RM systems
Ref: Ding,H. et al. Genome Announc 2 (1), e00050-14 (2014)
REBASE ref # 17142
Contig set: 3,811,946 bp
GenBank #: AYQA00000000 (NZ_AYQA00000000)
REBASE acronym: RcaB6
Org_num: 12243
All begin U716_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
2695 | transposase IS5 | |||
2700 | M | M.LcaS216ORF7430P (73% identity) | M.RcaB6ORF2700P | |
2705 | 80 aa hypothetical protein | |||
10700 | R | Pye32053ORF4698P (75% identity) | RcaB6ORF10710P | |
10705 | S | S.PbaCO2ORF2947P (29% identity) | S.RcaB6ORF10710P | |
10710 | M | M.Pye32053ORF4698P (84% identity) | M.RcaB6ORF10710P | |
10715 | 113 aa hypothetical protein | |||
9215 | phospholipase | |||
9220 | M | M.Rba636ORFAP (64% identity) | M.RcaB6ORF9220P | |
9225 | S | S.Msa044ORF14545P (44% identity) | S.RcaB6ORF9220P | |
9230 | pseudogene | |||
9235 | R | JspS638ORF16540P (73% identity) | RcaB6ORF9220P | |
9240 | 501 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
5915 | M | M.Lci001ORFAP (75% identity) | CCCGGG | M.RcaB6ORF5915P |
5920 | ATPase | |||
5935 | 156 aa hypothetical protein | |||
5940 | M | M.PphHM2ORF143P (13% identity) | GGCC | M.RcaB6ORF5940P |
10215 | ATPase AAA | |||
10220 | RM | M1.PpiP71ORF2916P (86% identity) | RcaB6ORF10220P | |
10225 | M | M1.DspRLORF11080P (75% identity) | M.RcaB6ORF10220P | |
10230 | type III restriction endonuclease | |||
10225 | pseudogene | |||
10230 | RM | PpiP71ORF2916P (85% identity) | RcaB6ORF10230P | |
10235 | USG protein | |||
5500 | 730 aa hypothetical protein | |||
5505 | M | M.Msp432AORF25255P (53% identity) | M.RcaB6ORF5505P | |
5510 | V | V.SspBHCAORFAP (52% identity) | V.RcaB6ORF5505P | |
5515 | 54 aa hypothetical protein | |||
6895 | MarR family transcriptional regulator | |||
6900 | M | M.RcaYW1ORF1750P (99% identity) | GANTC | M.RcaB6ORF6900P |
6905 | ribonuclease HII | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
5915 | DNA methyltransferase | |||
5920 | R | CinP73McrBP (71% identity) | RcaB6McrBP | |
5925 | R | CinP73McrCP (69% identity) | RcaB6McrCP | |
5930 | 363 aa hypothetical protein | |||
2505 | 258 aa hypothetical protein | |||
2510 | R | McrBC 5-methylcytosine restriction system | RcaB6McrC2P | |
2515 | chromosome partitioning protein ParB |