Rhodobacter capsulatus YW1 |
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Putative Rhodobacter capsulatus YW1 RM systems
Ref: Ding,H. et al. Genome Announc 2 (1), e00050-14 (2014)
REBASE ref # 17142
Contig set: 3,653,919 bp
GenBank #: AYPY00000000 (NZ_AYPY00000000)
REBASE acronym: RcaYW1
Org_num: 12241
All begin U703_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10185 | 48 aa hypothetical protein | |||
| ??? | M | M.HspBCM45ORF3665P (43% identity) | GATC | M.RcaYW1ORFBP |
| 10195 | 36 aa hypothetical protein | |||
| 1915 | 602 aa hypothetical protein | |||
| ??? | M | M.Ogu2003ORFAP (79% identity) | TCATGA | M.RcaYW1ORFAP |
| 1920 | R | Ogu2003ORFAP (16% identity) | TCATGA | RcaYW1ORFAP |
| 1925 | 53 aa hypothetical protein | |||
| 240 | TatD family hydrolase | |||
| 245 | R | CetTSPH2ORF12285P (85% identity) | CCWGG | RcaYW1ORF255P |
| 250 | V | V.CetTSPH2ORF12285P (78% identity) | V.RcaYW1ORF255P | |
| 255 | M | M.GspLW1ORFDP (87% identity) | CCWGG | M.RcaYW1ORF255P |
| 260 | DNA methyltransferase | |||
| 255 | DNA-cytosine methyltransferase | |||
| 260 | M | M.Rca37b4ORF14105P (99% identity) | M.RcaYW1ORF260P | |
| 265 | pseudogene | |||
| 2095 | Rha family transcriptional regulator | |||
| 2100 | M | M.Rba37ORF7020P (68% identity) | M.RcaYW1ORF2100P | |
| 2105 | 84 aa hypothetical protein | |||
| 2370 | 106 aa hypothetical protein | |||
| 2375 | M | M.Rsp17025ORF2112P (69% identity) | GATC | M.RcaYW1ORF2375P |
| 2380 | 123 aa hypothetical protein | |||
| 2460 | KilA | |||
| 2465 | M | M.Pko0001ORF11985P (70% identity) | M.RcaYW1ORF2465P | |
| 2470 | 80 aa hypothetical protein | |||
| 10045 | 66 aa hypothetical protein | |||
| 10050 | M | M1.Rca37b4ORF5040P (86% identity) | M.RcaYW1ORF10040P | |
| 10055 | 189 aa hypothetical protein | |||
| 1745 | ribonuclease HII | |||
| 1750 | M | M.RcaY262ORF1850P (100% identity) | GANTC | M.RcaYW1ORF1750P |
| 1755 | MarR family transcriptional regulator | |||