Frankia species CcI6 |
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Putative Frankia species CcI6 RM systems
Ref: Mansour,S. et al. unpublished
REBASE ref # 17042
Contig set: 5,578,623 bp
GenBank #: AYTZ00000000 (NZ_AYTZ00000000)
REBASE acronym: FspCcI6
Org_num: 12204
All begin CcI6DRAFT_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4612 | 56 aa hypothetical protein | |||
| 4613 | M | M.FspA2ORF768P (100% identity) | M.FspCcI6ORF4613P | |
| 4614 | S | S.FspA2ORF768P (100% identity) | S.FspCcI6ORF4613P | |
| 4615 | R | FspCeDORF3256P (99% identity) | FspCcI6ORF4613P | |
| 871 | 757 aa hypothetical protein | |||
| 872 | R | FspBRORF102446P (99% identity) | FspCcI6ORF874P | |
| 873 | S | S.FspA2ORF1902P (100% identity) | S.FspCcI6ORF874P | |
| 874 | M | M.FspBRORF102446P (100% identity) | M.FspCcI6ORF874P | |
| 875 | 76 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2667 | 642 aa hypothetical protein | |||
| 2668 | M | M.FspThrORF1852P (100% identity) | M.FspCcI6ORF2668P | |
| 2669 | serine/threonine protein kinase | |||
| 3449 | 1227 aa hypothetical protein | |||
| 3450 | RM | FspA2ORF4244P (99% identity) | FspCcI6ORF3450P | |
| 3451 | serine/threonine protein kinase | |||
| 4437 | 259 aa hypothetical protein | |||
| 4438 | R | Fsp523ORF3975P (99% identity) | CTGCAG | FspCcI6ORF4439P |
| 4439 | M | M.Fsp523ORF3975P (99% identity) | CTGCAG | M.FspCcI6ORF4439P |
| 4440 | 70 aa hypothetical protein | |||
| 3990 | 181 aa hypothetical protein | |||
| 3991 | RM | FspA2ORF4150P (99% identity) | FspCcI6ORF3991P | |
| 3992 | 1117 aa hypothetical protein | |||
| 3333 | 200 aa hypothetical protein | |||
| 3334 | V | V.FspBRORF106243P (100% identity) | V.FspCcI6ORF3335P | |
| 3335 | M | M.FspBRORF106243P (100% identity) | CCGCGG | M.FspCcI6ORF3335P |
| 3336 | 124 aa hypothetical protein | |||
| 2865 | 38 aa hypothetical protein | |||
| 2866 | M | M.FspBRORF101711P (99% identity) | M.FspCcI6ORF2866P | |
| 2867 | 203 aa hypothetical protein | |||
| 1169 | 105 aa hypothetical protein | |||
| ??? | M | M.FspThrORF1200P (100% identity) | CCCGGG | M.FspCcI6ORF1170P |
| 1171 | 97 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1396 | 393 aa hypothetical protein | |||
| 1397 | R | FspThrMrr2P (100% identity) | FspCcI6Mrr3P | |
| 1398 | 298 aa hypothetical protein | |||
| 1408 | acetyltransferase, ribosomal protein | |||
| 1409 | R | FspThrMrr3P (100% identity) | FspCcI6Mrr2P | |
| 1410 | 104 aa hypothetical protein | |||
| 2085 | carbohydrate ABC transporter membrane protein 2, | |||
| 2086 | R | FspThrMcrCP (100% identity) | FspCcI6McrCP | |
| 2087 | R | FspCeDMcrBP (99% identity) | FspCcI6McrBP | |
| 2088 | 414 aa hypothetical protein | |||
| 912 | 284 aa hypothetical protein | |||
| 913 | R | 255 aa hypothetical protein | FspCcI6MrrP | |
| 914 | 307 aa hypothetical protein | |||