Sediminibacterium species C3 |
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Putative Sediminibacterium species C3 RM systems
Ref: Ayarza,J.M. and Erijman,L. unpublished
REBASE ref # 17031
GenBank #: AXUM00000000
REBASE acronym: SspC3
Org_num: 12192
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | Ssp015ORFAP (91% identity) | SspC3ORFCP | |
| ??? | S | S.BmySIN22ORF5060P (44% identity) | S.SspC3ORFCP | |
| ??? | M | M.Ssp015ORFAP (94% identity) | M.SspC3ORFCP | |
| 1051 | MAG: hypothetical protein HWD63_13980 | |||
| 1053 | M | M.CchORF807P (90% identity) | M.SspC3ORFAP | |
| 1055 | S | S.CchORF807P (50% identity) | S.SspC3ORFAP | |
| 1057 | AAA family ATPase | |||
| 1058 | R | CbaC216ORF1832P (91% identity) | SspC3ORFAP | |
| 1061 | 128 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.Pli11SspCP (46% identity) | M.SspC3ORFEP | |
| ??? | RM | M1.PmuE5AORF567P (86% identity) | SspC3ORFGP | |
| ??? | type III restriction system endonuclease | |||
| ??? | type III restriction system methylase | |||
| ??? | RM | M2.TspB0ORF9865P (65% identity) | SspC3ORFHP | |
| ??? | helicase A859L | |||
| ??? | type III restriction system endonuclease | |||
| ??? | RM | PmuE5AORF567P (82% identity) | SspC3ORFIP | |
| ??? | helicase | |||
| ??? | S | S.Fsp34777ORFIP (41% identity) | S.SspC3ORFBP | |
| ??? | M | M.FspSB02ORF90P (92% identity) | M.SspC3ORFBP | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | EmeEMcrBP (44% identity) | SspC3McrBP | |
| ??? | R | EmeEMcrCP (28% identity) | SspC3McrCP | |
| ??? | helicase A859L | |||
| ??? | R | Pga16152ORFAP (80% identity) | SspC3ORFJP | |