Xylella fastidiosa 32 |
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Putative Xylella fastidiosa 32 RM systems
Ref: Alencar,V.C. et al. Genome Announc 2 (1) (2014)
REBASE ref # 17018
Contig set: 2,607,546 bp
GenBank #: AWYH00000000 (NZ_AWYH00000000)
REBASE acronym: XfaXf32
Org_num: 12190
All begin B398_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1285 | bifunctional aconitate hydratase | |||
| 1300 | R | XfaFb7ORF8270P (100% identity) | XfaXf32ORFAP | |
| 1305 | S | S.XfaFb7ORF8270P (100% identity) | S.XfaXf32ORFAP | |
| ??? | M | M.Xfa3124ORF12650P (65% identity) | M.XfaXf32ORFAP | |
| 1320 | 68 aa hypothetical protein | |||
| 12300 | pseudogene | |||
| 12305 | R | XfaORF2723P (99% identity) | XfaXf32ORF12315P | |
| 12310 | S | S.Xfa3124ORF12265P (100% identity) | S.XfaXf32ORF12315P | |
| 12315 | M | M.Xfa3124ORF12265P (88% identity) | M.XfaXf32ORF12315P | |
| 12320 | DEAD/DEAH box helicase | |||
| 12315 | N-6 DNA methylase:Type I restriction-modification system, M subunit | |||
| 12320 | R | XfaFb7ORF9900P (98% identity) | XfaXf32ORF12335P | |
| 12325 | S | S.Xfa3124ORF12285P (100% identity) | S.XfaXf32ORF12335P | |
| 12330 | pseudogene | |||
| 12335 | M | M.Xfa3124ORF12285P (100% identity) | M.XfaXf32ORF12335P | |
| 12340 | threonine transporter RhtB | |||
| 12380 | 108 aa hypothetical protein | |||
| 12385 | R | Xfa3124ORF12360P (100% identity) | XfaXf32ORF12400P | |
| 12395 | S | S.Xfa3124ORF12360P (100% identity) | S.XfaXf32ORF12400P | |
| 12400 | M | M.Xfa3124ORF12360P (100% identity) | M.XfaXf32ORF12400P | |
| 12405 | 51 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10145 | DNA methyltransferase | |||
| 10150 | M | M.XfaXf6cORF10320P (100% identity) | M.XfaXf32ORF10150P | |
| 10155 | 83 aa hypothetical protein | |||
| 6275 | 47 aa hypothetical protein | |||
| 6285 | M | M.XfaXf6cORF5915P (100% identity) | GCATGC | M.XfaXf32ORF6285P |
| 6290 | 190 aa hypothetical protein | |||
| 4250 | pseudogene | |||
| 4255 | M | M.Xfa3124ORFAP (100% identity) | M.XfaXf32ORF4255P | |
| 4260 | 232 aa hypothetical protein | |||
| 6445 | group II intron reverse transcriptase/maturase | |||
| 6455 | M | M.Xfa3124ORF6255P (78% identity) | M.XfaXf32ORF6455P | |
| 6460 | 252 aa hypothetical protein | |||
| 2520 | 80 aa hypothetical protein | |||
| 2525 | R | XfaFb7ORF6925P (100% identity) | CGTACG | XfaXf32ORF2530P |
| 2530 | M | M.XfaORF641P (100% identity) | CGTACG | M.XfaXf32ORF2530P |
| 2540 | 30 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5185 | 3-oxoacyl-ACP synthase | |||
| 5190 | M | M.XfaFb7ORF4245P (100% identity) | M.XfaXf32ORF5190P | |
| 5195 | R | XfaFb7ORF4245P (100% identity) | XfaXf32ORF5190P | |
| 5205 | ferredoxin | |||