Bibersteinia trehalosi USDA-ARS-USMARC-188 |
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Putative Bibersteinia trehalosi USDA-ARS-USMARC-188 RM systems
Ref: Harhay,G.P. et al. unpublished
REBASE ref # 17204
Complete sequence: 2,340,975 bp
GenBank #: CP006954
REBASE acronym: Btr188
Org_num: 8807
All begin F542_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1170 | Beta-lactamase fold protein | |||
| 1180 | R | Btr192IIIP (99% identity) | ACGNNNNNNCGT | Btr188IIP |
| 1190 | transcriptional regulator | |||
| 1200 | S | S.Btr192III (100% identity) | ACGNNNNNNCGT | S.Btr188II |
| 1210 | Filamentation induced by cAMP protein Fic | |||
| 1220 | M | M.Btr192III (100% identity) | ACGNNNNNNCGT | M.Btr188II |
| 1230 | AraC family transcriptional regulator | |||
| 10110 | Asparaginyl-tRNA synthetase | |||
| 10120 | R | Btr192ORF11890P (100% identity) | TAAANNNNNNTGT | Btr188IIIP |
| 10130 | 169 aa hypothetical protein | |||
| 10140 | 213 aa hypothetical protein | |||
| 10150 | S | S.Btr192ORF11890P (100% identity) | TAAANNNNNNTGT | S.Btr188III |
| 10160 | M | M.Mha5106ORF3625P (96% identity) | TAAANNNNNNTGT | M.Btr188III |
| 10170 | Bifunctional protein GlmU | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 800 | 360 aa hypothetical protein | |||
| 810 | R | Btr192ORF21780P (100% identity) | CCGG | Btr188ORF820P |
| 820 | M | M.Btr192V (100% identity) | CCGG | M.Btr188ORF820P |
| 830 | 38 aa hypothetical protein | |||
| 1750 | Peptidyl-prolyl cis-trans isomerase | |||
| 1760 | RM | Btr192ORF20830P (100% identity) | Btr188ORF1760P | |
| 1770 | 39 aa hypothetical protein | |||
| 1780 | FRG domain protein | |||
| ??? | RM | Btr192ORF20770P (99% identity) | Btr188ORF1790P | |
| 1820 | 1,4-dihydroxy-2-naphthoate synthase | |||
| 4540 | 3-dehydroquinate synthase | |||
| 4550 | M | M.Btr192I (100% identity) | GATC | M.Btr188I |
| 4560 | DNA polymerase IV | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10520 | 38 aa hypothetical protein | |||
| 10530 | M | M.Btr192II (100% identity) | ACATC | M.Btr188ORF10530P |
| 10540 | R | Btr192II (100% identity) | ACATC | Btr188ORF10530P |
| 10550 | esterase/lipase | |||