Halomonas species PBN3 |
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Putative Halomonas species PBN3 RM systems
Ref: Overholt,W.A. et al. Genome Announc 1 (6), e01015-13 (2013)
REBASE ref # 16893
Contig set: 3,668,536 bp
GenBank #: AXCA00000000 (NZ_AXCA00000000)
REBASE acronym: HspPBN3
Org_num: 11939
All begin Q671_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 13550 | 234 aa hypothetical protein | |||
| 13555 | R | HspA404ORF17485P (90% identity) | HspPBN3ORF13555P | |
| 13560 | metal-dependent hydrolase | |||
| 12955 | 80 aa hypothetical protein | |||
| 12960 | R | SspLHMORF6545P (92% identity) | HspPBN3ORF12990P | |
| 12965 | 377 aa hypothetical protein | |||
| 12970 | S | 55 aa hypothetical protein | S.HspPBN3ORF12990P | |
| 12975 | 42 aa hypothetical protein | |||
| 12980 | 70 aa hypothetical protein | |||
| 12985 | 340 aa hypothetical protein | |||
| 12990 | M | M.HalM2ORFFP (93% identity) | M.HspPBN3ORF12990P | |
| 13000 | 77 aa hypothetical protein | |||
| 4565 | 903 aa hypothetical protein | |||
| 4570 | M | M.Hsp3HORFBP (92% identity) | M.HspPBN3ORF4570P | |
| 4575 | 33 aa hypothetical protein | |||
| 2105 | transposase IS605 | |||
| 2110 | R | HspSW72ORF13895P (96% identity) | HspPBN3ORF2120P | |
| 2115 | 386 aa hypothetical protein | |||
| 2120 | M | M.HalM2ORFDP (96% identity) | M.HspPBN3ORF2120P | |
| 2125 | S | S.HspPGE1ORF6400P (61% identity) | S.HspPBN3ORF2120P | |
| 2130 | 576 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2535 | 1004 aa hypothetical protein | |||
| 2540 | RM | Hsp3HORFCP (75% identity) | HspPBN3ORF2540P | |
| 2545 | transposase IS66 | |||
| 65 | 177 aa hypothetical protein | |||
| 70 | V | V.HelDL7ORF18620P (67% identity) | V.HspPBN3ORF75P | |
| 75 | M | M.HelDL7ORF18620P (76% identity) | M.HspPBN3ORF75P | |
| 80 | 130 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12575 | 64 aa hypothetical protein | |||
| 12580 | R | Hsp11059ORF14825P (95% identity) | HspPBN3ORF12550P | |
| 12585 | 319 aa hypothetical protein | |||
| 4060 | 261 aa hypothetical protein | |||
| 4065 | M | M.HspPGE1ORF13110P (40% identity) | M.HspPBN3ORF4065P | |
| 4070 | 637 aa hypothetical protein | |||
| 4075 | R | HsoCKY01ORFCP (80% identity) | HspPBN3ORF4065P | |
| 4080 | 69 aa hypothetical protein | |||
| 10805 | 571 aa hypothetical protein | |||
| 10810 | R | Csp512ORF6400P (93% identity) | HspPBN3ORF10800P | |
| 10815 | 40 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6215 | methylmalonate-semialdehyde dehydrogenase | |||
| 6220 | R | Hsp3HORFDP (88% identity) | HspPBN3ORF6220P | |
| 6225 | alkylhydroperoxidase | |||