Salinispira pacifica L21-RPul-D2 |
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Putative Salinispira pacifica L21-RPul-D2 RM systems
Ref: Spring,S. et al. unpublished
REBASE ref # 20087
Complete sequence: 3,782,798 bp
GenBank #: CP006939
REBASE acronym: SpaD2
Org_num: 11879
All begin L21SP2_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 681 | 47 aa hypothetical protein | |||
| 682 | M | Type I restriction-modification system, | M.SpaD2ORF682P | |
| 683 | 227 aa hypothetical protein | |||
| 2041 | 114 aa hypothetical protein | |||
| 2042 | M | Type I restriction-modification system, | M.SpaD2ORF2042P | |
| 2043 | 45 aa hypothetical protein | |||
| 2648 | 264 aa hypothetical protein | |||
| 2649 | R | DhyAcRS1ORF4275P (92% identity) | GCCNNNNNNTCG | SpaD2IIP |
| 2650 | S | S.VcrJ55ORF1370270P (24% identity) | GCCNNNNNNTCG | S.SpaD2II |
| 2651 | M | M2.DhyAcRS1ORF4275P (93% identity) | GCCNNNNNNTCG | M2.SpaD2II |
| 2652 | M | M1.DhyAcRS1ORF4275P (94% identity) | GCCNNNNNNTCG | M1.SpaD2II |
| 2653 | Mobile element protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 219 | 156 aa hypothetical protein | |||
| 220 | M | M.SsmMORF1459P (54% identity) | ATTAAT | M.SpaD2IV |
| 221 | GTP-binding protein HflX | |||
| 665 | 234 aa hypothetical protein | |||
| 666 | M | M.Msp22773ORF115P (46% identity) | CCWGG | M.SpaD2III |
| ??? | V | V.HthJR2ORF5675P (59% identity) | V.SpaD2IIIP | |
| 667 | pseudogene | |||
| 1596 | UDP-N-acetylmuramoylalanyl-D-glutamate--L- | |||
| 1597 | M | M.Saf8902I (35% identity) | RAATTY | M.SpaD2I |
| 1598 | HflC protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1093 | 81 aa hypothetical protein | |||
| 1094 | R | Lsp138ORF2415P (56% identity) | SpaD2ORF1102P | |
| 1095 | M | 74 aa hypothetical protein | M.SpaD2ORF1102BP | |
| 1096 | Mobile element protein | |||
| 1097 | 153 aa hypothetical protein | |||
| 1098 | 274 aa hypothetical protein | |||
| 1099 | 100 aa hypothetical protein | |||
| 1100 | Mobile element protein | |||
| 1101 | Mobile element protein | |||
| 1102 | M | M.Cvi687B0ORF23090P (26% identity) | M.SpaD2ORF1102AP | |
| 1103 | ATP-dependent endonuclease, OLD family | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1505 | DNA helicase | |||
| 1506 | R | 1090 aa hypothetical protein | SpaD2ORF1506P | |
| 1507 | 376 aa hypothetical protein | |||
| 2655 | 56 aa hypothetical protein | |||
| 2656 | R | Cba70BAMcrBP (40% identity) | SpaD2McrBP | |
| 2657 | R | Hco17BMcrCP (23% identity) | SpaD2McrCP | |
| 2658 | Abortive infection bacteriophage resistance | |||