Salmonella enterica subsp. enterica serovar Agona 24249 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Agona 24249 RM systems
Ref: McCusker,M.P. et al. unpublished
REBASE ref # 17264
Complete sequence: 4,762,840 bp
GenBank #: CP006876
REBASE acronym: Sen24249
Org_num: 11592
All begin Q786_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 22300 | molecular chaperone Tir | |||
| 22305 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen24249ORF22305P |
| 22310 | M | M2.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M2.Sen24249ORF22305P |
| 22315 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen24249ORF22305P |
| 22320 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen24249ORF22305P |
| 22325 | pseudogene | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5250 | hydrolase | |||
| 5255 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen24249ORF5255P |
| 5260 | very short patch repair endonuclease | |||
| 5255 | DNA-cytosine methyltransferase | |||
| 5260 | V | V.StyUK1DcmP (100% identity) | V.Sen24249DcmP | |
| 5265 | multidrug transporter | |||
| 13210 | Presumed portal vertex protein | |||
| 13215 | R | SenSH7ORF6090P (100% identity) | CGGCCG | Sen24249ORF13220P |
| 13220 | M | M.SenSH7ORF6090P (100% identity) | CGGCCG | M.Sen24249ORF13220P |
| 13225 | pseudogene | |||
| 13235 | replication endonuclease | |||
| 13240 | M | M.SenSH7ORF6070P (100% identity) | GATC | M.Sen24249ORF13240P |
| 13245 | 75 aa hypothetical protein | |||
| 16510 | Fis family transcriptional regulator | |||
| 16515 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen24249ORF16515P |
| 16520 | 63 aa hypothetical protein | |||
| 16995 | ribulose-phosphate 3-epimerase | |||
| 17000 | M | DNA adenine methylase | GATC | M.Sen24249DamP |
| 17005 | cell division protein DamX | |||
| 22230 | 108 aa hypothetical protein | |||
| 22235 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen24249ORF22235P |
| 22240 | 670 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1750 | sugar transporter | |||
| 1755 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen24249ORF1755P |
| ??? | R | SenSA5ORF13013P (100% identity) | CAGAG | Sen24249ORF1755P |
| 1765 | cytochrome D ubiquinol oxidase subunit I | |||