Haemophilus parasuis SW114 |
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Putative Haemophilus parasuis SW114 RM systems
Ref: Kuehn,J.S. et al. Genome Announc 1 (5), e00739-13 (2013)
REBASE ref # 16660
Contig set: 1,938,544 bp
GenBank #: APBU00000000 (NZ_APBU00000000)
REBASE acronym: HpaSW114
Org_num: 11490
All begin HPSSW114_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1977 | S | S1.Gpa4ORF1255P (60% identity) | S.HpaSW114ORF1977P | |
| 1075 | methyltransferase GidB | |||
| 1076 | M | M.HpaD74ORF1601P (99% identity) | M.HpaSW114ORF1076P | |
| 1077 | divergent AAA domain protein | |||
| 1078 | R | GpaHPS12ORF10755P (99% identity) | HpaSW114ORF1076P | |
| 1079 | S | S.GpaZ44ORF420P (100% identity) | S.HpaSW114ORF1076P | |
| 1080 | tRNA uridine 5-carboxymethylaminomethyl | |||
| 1558 | AcrR family transcriptional regulator | |||
| 1559 | R | Gpa1433ORF9165P (99% identity) | HpaSW114ORF1565P | |
| 1560 | 145 aa hypothetical protein | |||
| 1561 | 255 aa hypothetical protein | |||
| 1562 | S | S2.GpaZ44ORF2455P (54% identity) | S.HpaSW114ORF1565P | |
| 1563 | glutamate synthase alpha subunit | |||
| 1564 | glutamate synthase alpha subunit domain protein | |||
| 1565 | M | M.GpaZ44ORF2455P (100% identity) | M.HpaSW114ORF1565P | |
| 1566 | naphthoate synthase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1759 | 37 aa hypothetical protein | |||
| ??? | S | S.Ami305ORF9406P (100% identity) | S.HpaSW114ORF1761P | |
| ??? | RM | N-6 DNA Methylase family protein | HpaSW114ORF1761P | |
| 1762 | 126 aa hypothetical protein | |||
| 543 | 67 aa hypothetical protein | |||
| 544 | RM | M.HpaST41ORF4905P (49% identity) | HpaSW114ORF544P | |
| 239 | 42 aa hypothetical protein | |||
| 240 | M | M.Hpa174ORF859P (90% identity) | GATC | M.HpaSW114ORF240P |
| 241 | replication P family protein | |||
| 575 | lysogenization regulator | |||
| 576 | R | HpaD74ORF1116P (100% identity) | GGCC | HpaSW114ORF577P |
| 577 | M | M.HpaD74ORF1116P (100% identity) | GGCC | M.HpaSW114ORF577P |
| 578 | ATP-dependent protease La | |||
| 1906 | neurotransmitter symporter family protein | |||
| 1907 | M | M.GpaHPS1ORF3925P (100% identity) | GATC | M.HpaSW114ORF1907P |
| 1908 | 3-dehydroquinate synthase | |||
| 1691 | 429 aa hypothetical protein | |||
| 1692 | RM | Gpa412ORF11745P (84% identity) | HpaSW114ORF1692P | |