Sphingobium baderi LL03 |
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Putative Sphingobium baderi LL03 RM systems
Ref: Kaur,J. et al. Genome Announc 1 (5), e00751-13 (2013)
REBASE ref # 16657
Contig set: 4,848,286 bp
GenBank #: ATIB00000000 (NZ_ATIB00000000)
REBASE acronym: SbaLL03
Org_num: 11522
All begin L485_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 21600 | 457 aa hypothetical protein | |||
| 21605 | M | M.NspTHN1I (82% identity) | M.SbaLL03ORF21605P | |
| 21610 | 384 aa hypothetical protein | |||
| 21615 | S | S.BpsR983ORF1209P (63% identity) | S.SbaLL03ORF21605P | |
| 21620 | R | BpsR983ORF1209P (80% identity) | SbaLL03ORF21605P | |
| 21625 | 360 aa hypothetical protein | |||
| 16435 | 314 aa hypothetical protein | |||
| 16440 | M | M.NspPP1YORF2797P (88% identity) | M.SbaLL03ORF16440P | |
| 16445 | S | S.SspG64ORF18100P (57% identity) | S.SbaLL03ORF16440P | |
| 16450 | 608 aa hypothetical protein | |||
| 16455 | R | NspPP1YORF2797P (95% identity) | SbaLL03ORF16440P | |
| 16460 | 1250 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7235 | 96 aa hypothetical protein | |||
| 7240 | M | M.SspX33ORF9805P (95% identity) | M.SbaLL03ORF7240P | |
| 7245 | 85 aa hypothetical protein | |||
| 55 | 286 aa hypothetical protein | |||
| ??? | M | M.SspTKSORF30175P (87% identity) | GAAGA | M.SbaLL03ORFAP |
| 60 | XRE family transcriptional regulator | |||
| 15070 | dihydropteroate synthase | |||
| 15075 | M | M.SbaSC1ORF9380P (99% identity) | GANTC | M.SbaLL03ORF15075P |
| 15080 | ArsR family transcriptional regulator | |||
| 750 | 131 aa hypothetical protein | |||
| 755 | M | M.SspTA15ORF18800P (59% identity) | M.SbaLL03ORF755P | |
| 770 | 343 aa hypothetical protein | |||
| 22375 | 166 aa hypothetical protein | |||
| 22380 | M | M.SspCFD1ORFFP (40% identity) | GATC | M.SbaLL03ORF22380P |
| 22385 | 156 aa hypothetical protein | |||
| 16315 | 121 aa hypothetical protein | |||
| 16320 | M | M.SspC32ORF5145P (95% identity) | M1.SbaLL03ORF16320P | |
| 16325 | M | M.NspES21ORF10005P (76% identity) | M2.SbaLL03ORF16320P | |
| 16330 | 160 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 415 | transposase | |||
| 420 | R | Nta16725McrCP (100% identity) | SbaLL03McrCP | |
| 425 | R | SspTKSMcrBP (100% identity) | SbaLL03McrBP | |
| 430 | 242 aa hypothetical protein | |||