Salmonella enterica subsp. enterica serovar Heidelberg SARA33 |
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Putative Salmonella enterica subsp. enterica serovar Heidelberg SARA33 RM systems
Ref: Kroft,B.S. et al. Genome Announc 1 (5), e00806-13 (2013)
REBASE ref # 16627
Contig set: 4,975,340 bp
GenBank #: AUQD00000000 (NZ_AUQD00000000)
REBASE acronym: Sen2213
Org_num: 11533
All begin SEEHRA23_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 13730 | endoribonuclease SymE | |||
| ??? | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen2213ORFBP |
| ??? | M | M.Sens12373ORF19415P (92% identity) | GAGNNNNNNRTAYG | M.Sen2213ORFBP |
| 13855 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen2213ORFBP |
| 13895 | pseudogene | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 905 | 73 aa hypothetical protein | |||
| ??? | M | M.SspPIBORF23080P (100% identity) | M.Sen2213ORF910P | |
| 915 | 57 aa hypothetical protein | |||
| 14770 | RM | Sens12373ORF19575P (99% identity) | GATCAG | Sen2213ORF14770P |
| 14775 | 952 aa hypothetical protein ID866_2842 | |||
| 12630 | 62 aa hypothetical protein | |||
| 12635 | M | M.SenC2217ORF6395P (100% identity) | GATC | M.Sen2213ORF12635P |
| 12640 | exonuclease | |||
| 14775 | 952 aa hypothetical protein ID866_2842 | |||
| 14710 | R | Ssp8103ORF19050P (100% identity) | Sen2213ORF14710P | |
| 14715 | 104 aa hypothetical protein | |||
| 1680 | pseudogene | |||
| 1685 | M | M.SenRM079Dam3P (100% identity) | GATC | M.Sen2213DamP |
| 1690 | ribulose-phosphate 3-epimerase | |||
| 5885 | Fis family transcriptional regulator | |||
| 5940 | M | M.SenCAE1ORF2145P (86% identity) | ATGCAT | M.Sen2213ORF5940P |
| 5890 | 54 aa hypothetical protein | |||
| 11420 | RNA-binding protein | |||
| ??? | M | M.Sen707ORF345P (100% identity) | GATC | M.Sen2213ORFAP |
| 11425 | 70 aa hypothetical protein | |||
| 6500 | 100 aa hypothetical protein | |||
| 6505 | M | M.YrupYR1ORFCP (89% identity) | CCNGG | M.Sen2213ORF6505P |
| 6510 | 143 aa hypothetical protein | |||
| 7035 | hydrolase | |||
| 7040 | M | M.SenZ223DcmP (100% identity) | CCWGG | M.Sen2213DcmP |
| 7045 | V | V.StyTDcmP (100% identity) | V.Sen2213DcmP | |
| 7050 | multidrug transporter | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13060 | cytochrome D ubiquinol oxidase subunit I | |||
| 13175 | R | Sens12373ORF17180P (99% identity) | CAGAG | Sen2213ORF13065P |
| 13065 | M | M.SenC2217ORF18390P (100% identity) | CAGAG | M.Sen2213ORF13065P |
| 13070 | Heavy-metal-associated domain-containing | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13855 | pseudogene | |||
| 13895 | R | StyUK1MrrP (100% identity) | Sen2213MrrP | |
| 13745 | membrane protein | |||