Clostridium species DL-VIII |
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Putative Clostridium species DL-VIII RM systems
Ref: Taghavi,S. et al. Genome Announc 1 (4), e00605-13 (2013)
REBASE ref # 16427
Complete sequence: 6,477,357 bp
GenBank #: CM001240
REBASE acronym: CspDL
Org_num: 11250
All begin CDLVIII_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5507 | 120 aa hypothetical protein | |||
| 5508 | R | Cac10703ORF2330P (81% identity) | CspDLORF5513P | |
| 5509 | 186 aa hypothetical protein | |||
| 5510 | restriction modification system DNA specificity | |||
| 5511 | integrase family protein | |||
| 5512 | S | S.PmeBin437ORFAP (38% identity) | S.CspDLORF5513P | |
| 5513 | M | M.CbuSJ1ORFCP (82% identity) | M.CspDLORF5513P | |
| 5514 | 143 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5907 | DNA polymerase III, epsilon subunit | |||
| 5908 | M | M.CbaSORF2627P (70% identity) | ATGCAT | M.CspDLORF5908P |
| 5909 | 251 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3792 | NUDIX hydrolase | |||
| 3793 | R | Cpa598ORF12465P (94% identity) | CspDLORF3793P | |
| 3794 | 107 aa hypothetical protein | |||
| 5295 | 77 aa hypothetical protein | |||
| 5296 | R | CbaC148McrCP (89% identity) | CspDLMcrCP | |
| 5297 | R | CbaC148McrBP (82% identity) | CspDLMcrBP | |
| 5298 | 530 aa hypothetical protein | |||