Helicobacter fennelliae MRY12-0050 |
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Putative Helicobacter fennelliae MRY12-0050 RM systems
Ref: Rimbara,E. et al. unpublished
REBASE ref # 16445
GenBank #: BASD00000000
REBASE acronym: Hfe50
Org_num: 11242
All begin HFN_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2115 | 109 aa hypothetical protein | |||
| 2116 | S | S.Hfe50ORF2116P (100% identity) | S.Hfe50ORF2109P | |
| 2117 | 88 aa hypothetical protein | |||
| 2115 | 109 aa hypothetical protein | |||
| 2116 | S | S.Hfe50ORF2109P (100% identity) | S.Hfe50ORF2116P | |
| 2117 | 88 aa hypothetical protein | |||
| 995 | carboxynorspermidine dehydrogenase, putative | |||
| 996 | M | M.Hfe11613ORF656P (100% identity) | M.Hfe50ORF996P | |
| 997 | 216 aa hypothetical protein | |||
| 998 | S | S.Hfe11613ORF656P (100% identity) | S.Hfe50ORF996P | |
| 999 | 100 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2293 | acetyltransferase, GNAT family | |||
| 2294 | M | M.Hfe11613III (100% identity) | GATC | M.Hfe50ORF2294P |
| 2295 | R | Hfe11613IIIP (100% identity) | GATC | Hfe50ORF2294P |
| 2296 | GMP synthase [glutamine-hydrolyzing] | |||
| 1631 | 187 aa hypothetical protein | |||
| 1632 | M | M.Hfe13102ORF599P (100% identity) | TCNNGA | M.Hfe50ORF1632P |
| 1633 | 63 aa hypothetical protein | |||
| 1364 | 126 aa hypothetical protein | |||
| 1365 | RM | Hfe11613ORF1576P (100% identity) | Hfe50ORF1365P | |
| 1366 | 61 aa hypothetical protein | |||
| 1217 | 47 aa hypothetical protein | |||
| 1218 | RM | type IIS restriction /modification | Hfe50ORF1218P | |
| 1219 | 66 aa hypothetical protein | |||
| 925 | glutamate synthase [NADPH] small chain | |||
| 926 | R | Hfe13102ORF1931P (16% identity) | GTAC | Hfe50ORF927P |
| 927 | M | M.Hfe13101II (100% identity) | GTAC | M.Hfe50ORF927P |
| 928 | type II restriction enzyme M protein | |||
| 68 | 239 aa hypothetical protein, CF-32 family | |||
| 69 | R | Hci629ORFEP (62% identity) | GTSAC | Hfe50ORF69P |
| 70 | methyl-accepting chemotaxis protein tlpA | |||
| 70 | methyl-accepting chemotaxis protein tlpA | |||
| ??? | RM | hypothetical protein | Hfe50ORF71P | |
| 73 | 48 aa hypothetical protein | |||
| 974 | 365 aa hypothetical protein | |||
| 975 | RM | Hfe13101ORF1979BP (80% identity) | Hfe50ORF975P | |
| 976 | integral membrane protein | |||
| 2136 | 92 aa hypothetical protein | |||
| 2137 | M | M.Hfe13101VI (100% identity) | GCATC | M.Hfe50ORF2137P |
| 2138 | 623 aa hypothetical protein | |||
| 2138 | 623 aa hypothetical protein | |||
| 2139 | M | M.Hfe13101ORF90P (100% identity) | CCATC | M.Hfe50ORF2139P |
| 2140 | 186 aa hypothetical protein | |||
| 2157 | probable short-chain dehydrogenase | |||
| 2158 | R | Hfe11613ORF531P (100% identity) | GGATG | Hfe50ORF2159P |
| 2159 | M | M2.Hfe11613ORF531P (100% identity) | GGATG | M.Hfe50ORF2159P |
| 2160 | ulcer associated adenine specific DNA | |||
| 2159 | modification methylase FokI | |||
| 2160 | M | M1.Hfe11613ORF531P (100% identity) | CATG | M.Hfe50ORF2160P |
| 2161 | predicted secreted protein | |||
| 2163 | 37 aa hypothetical protein | |||
| 2164 | M | M.Hfe13102ORF143P (96% identity) | GCNGC | M.Hfe50ORF2164P |
| ??? | R | Hfe11613ORF528P (100% identity) | GCNGC | Hfe50ORF2164P |
| 2167 | tRNA (adenine37-N(6))-methyltransferase TrmN6 | |||
| 1574 | 97 aa hypothetical protein | |||
| 1575 | M | M.Hfe13102ORF1855P (100% identity) | AAGCTT | M.Hfe50ORF1575P |
| 1576 | 52 aa hypothetical protein | |||
| 1844 | 115 aa hypothetical protein | |||
| 1845 | M | M.Hfe11613II (99% identity) | ACNGT | M.Hfe50ORF1845P |
| 1846 | 249 aa hypothetical protein | |||
| 1847 | modification methylase | |||
| 1848 | R | Hfe11613IIP (100% identity) | ACNGT | Hfe50ORF1845P |
| 1849 | 37 aa hypothetical protein | |||
| 1846 | 249 aa hypothetical protein | |||
| 1847 | M | M.Hfe11613ORF254P (100% identity) | CCWGG | M.Hfe50ORF1847P |
| 1848 | 149 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1417 | 251 aa hypothetical protein | |||
| 1418 | M | M.Hfe11613ORF1034P (100% identity) | M.Hfe50ORF1418P | |
| 1419 | 87 aa hypothetical protein | |||
| 1379 | 64 aa hypothetical protein | |||
| 1380 | M | M.Hfe13102ORF1242P (50% identity) | M.Hfe50ORF1380P | |
| 2429 | 63 aa hypothetical protein | |||
| ??? | M | M.Hfe11613ORF1603P (100% identity) | M.Hfe50ORF2430P | |
| 2432 | R | Hfe11613ORF1603P (100% identity) | Hfe50ORF2430P | |
| 2433 | 45 aa hypothetical protein | |||
| 516 | 50 aa hypothetical protein | |||
| 517 | R | Hfe11613ORF1904P (100% identity) | Hfe50ORF518P | |
| ??? | M | M.Hfe11613ORF1904P (99% identity) | M.Hfe50ORF518P | |
| 520 | 4-oxalocrotonate tautomerase | |||