Lactobacillus gasseri 2016 |
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Putative Lactobacillus gasseri 2016 RM systems
Ref: Karlyshev,A.V. et al. Genome Announc 1 (4), e00624-13 (2013)
REBASE ref # 16397
GenBank #: AUUE00000000
REBASE acronym: Lga2016
Org_num: 11212
All begin M497_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6535 | 296 aa hypothetical protein | |||
| 6540 | M | M.LgrVSI07ORF3855P (100% identity) | M.Lga2016ORF6540P | |
| 6545 | S | S1.LgrVSI07ORF3855P (100% identity) | S1.Lga2016ORF6540P | |
| 6550 | integrase | |||
| 6555 | S | S2.LgrVSI07ORF3855P (99% identity) | S2.Lga2016ORF6540P | |
| 6560 | R | LgrVSI07ORF3855P (99% identity) | Lga2016ORF6540P | |
| 6565 | 689 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9450 | terminase | |||
| 9455 | M | M.LgaVSI26ORF7025P (100% identity) | M.Lga2016ORF9455P | |
| 9460 | 206 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9350 | 430 aa hypothetical protein | |||
| 9355 | R | LgaVSI26ORF6925P (100% identity) | Lga2016ORF9360P | |
| 9360 | M | M.LgaVSI26ORF6925P (99% identity) | M.Lga2016ORF9360P | |
| 9365 | C | C.LgaVSI26ORF6925P (100% identity) | C.Lga2016ORF9360P | |
| 9370 | ATPase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1780 | exodeoxyribonuclease | |||
| 1785 | R | LgrVSI07ORF180P (99% identity) | Lga2016ORF1785P | |
| 1790 | alpha/beta hydrolase | |||
| 6560 | type III restriction endonuclease subunit R | |||
| 6565 | R | LgaGmrSDP (100% identity) | Lga2016GmrSDP | |
| 109555 | FAD-binding protein | |||