Campylobacter jejuni |
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Putative Campylobacter jejuni RM systems
Ref: Alfredson,D.A. and Korolik,V. Plasmid 50 (2), 152-160 (2003)
REBASE ref # 21918
| Sequence length: | GenBank #: | |
| Chromosome: | 1,442,514 bp | FCEZ00000000 (NZ_FCEZ00000000) |
| Chromosome: | 1,615,620 bp | FPEE00000000 (NZ_FPEE00000000) |
REBASE acronym: CjeBf
Org_num: 19332
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16 | NADP-dependent alcohol dehydrogenase | |||
| 17 | R | Cje702ORF8170P (100% identity) | CjeBfORFGP | |
| 18 | 321 aa hypothetical protein | |||
| 19 | 706 aa hypothetical protein | |||
| 20 | S | S1.Cje262ORF40P (100% identity) | S1.CjeBfORFGP | |
| 23 | S | S2.Cje262ORF40P (100% identity) | S2.CjeBfORFGP | |
| Chromosome | ||||
| 32 | NADP-dependent alcohol dehydrogenase | |||
| 33 | R | Csp9ORF7895P (100% identity) | GCANNNNNRTTA | Cje11168HORFEP |
| 35 | Uncharacterized protein | |||
| 36 | 134 aa hypothetical protein | |||
| 37 | S | S.Csp9ORF7895P (100% identity) | GCANNNNNRTTA | S.Cje11168HORFEP |
| 40 | 84 aa hypothetical protein | |||
| 41 | Uncharacterized protein | |||
| 42 | 102 aa hypothetical protein | |||
| 43 | M | M1.Csp93259ORF7950P (100% identity) | GCANNNNNRTTA | M.Cje11168HORFEP |
| 45 | DNA methyltransferase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1 | 73 aa hypothetical protein | |||
| 2 | R | CjeR73ORF8285P (100% identity) | CATG | CjeBfORFAP |
| 5 | M | M2.CjeR73ORF8285P (100% identity) | CATG | M.CjeBfORFAP |
| 6 | 7-cyano-7-deazaguanine reductase | |||
| 6 | bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase | |||
| 7 | R | CjeJ026ORF18570P (100% identity) | GANTC | CjeBfORFHP |
| 8 | M | M.Cje702ORF8400P (100% identity) | GANTC | M.CjeBfORFHP |
| 9 | 72 aa hypothetical protein | |||
| 10 | oxidoreductase | |||
| 11 | M | M1.CjeR73ORF8285P (100% identity) | CATG | M.CjeBfORFIP |
| 12 | 353 aa hypothetical protein | |||
| 21 | acetate kinase | |||
| 22 | RM | Cje702ORF3305P (100% identity) | CjeBfORFEP | |
| 23 | membrane protein | |||
| 25 | carbamoyl phosphate synthase large subunit | |||
| 26 | M | M.CjeJ026ORF2730P (99% identity) | GTAC | M.CjeBfORFDP |
| 27 | R | CjeJ026ORF2730P (100% identity) | GTAC | CjeBfORFDP |
| 29 | 140 aa hypothetical protein | |||
| 46 | thiamine biosynthesis protein ThiH | |||
| 47 | R | CjeJ026ORF12910P (100% identity) | GCGC | CjeBfORFFP |
| 48 | M | M.CjeJ026ORF12910P (96% identity) | GCGC | M.CjeBfORFFP |
| 49 | thiazole synthase | |||
| 56 | translation initiation factor IF-3 | |||
| 58 | M | M.Csp6462ORF320P (77% identity) | RAATTY | M.CjeBfORFBP |
| 59 | energry transducer TonB | |||
| Chromosome | ||||
| 1 | Uncharacterized protein | |||
| 3 | RM | CjemfKORF180P (69% identity) | Cje11168HORFAAP | |
| 4 | RM | CjeJ047ORF310BP (100% identity) | Cje11168HORFABP | |
| 5 | uncharacterized protein | |||
| 5 | Acetate kinase | |||
| 6 | RM | CjemfKORF3435P (100% identity) | GKAAYG | Cje11168HORFCP |
| 7 | Uncharacterized protein | |||
| 11 | Translation initiation factor IF-3 | |||
| ??? | M | M.Csp93259ORF1035P (100% identity) | RAATTY | M.Cje11168HORFBP |
| 14 | 138 aa hypothetical protein | |||
| 21 | NAD-dependent protein deacylase | |||
| 23 | RM | CjemfKORF5245P (44% identity) | Cje11168HORFDP | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 45 | ATPase, partial | |||
| 46 | M | M.Cje702ORF1385P (100% identity) | M.CjeBfORFCP | |
| 47 | R | Cje702ORF1385P (98% identity) | CjeBfORFCP | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22 | ribosome maturation factor | |||
| 24 | R | Cje702McrBP (100% identity) | CjeBfMcrBP | |
| 25 | R | Cje702McrCP (100% identity) | CjeBfMcrCP | |
| 26 | membrane protein | |||
| Chromosome | ||||
| 146 | 112 aa hypothetical protein | |||
| 147 | R | Csp93257McrBP (100% identity) | Cje11168HMcrBP | |
| 148 | R | CjemfKMcrCP (100% identity) | Cje11168HMcrCP | |
| 149 | Membrane protein | |||