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Putative Mannheimia haemolytica USMARC_2286 RM systems
Ref: Koren,S. et al. unpublished
REBASE ref # 16306
Complete sequence: 2,658,507 bp
GenBank #: CP006619
REBASE acronym: Mha2286
Org_num: 10953
All begin N220_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
3275 | B12-dependent methionine synthase | |||
3280 | M | M.Pba12565ORF10250P (100% identity) | CAACNNNNGT | M.Mha2286I |
3285 | S | S1.MhaGHORF8210P (100% identity) | CAACNNNNGT | S1.Mha2286I |
3290 | S | S2.Mhas184ORF2820P (100% identity) | S2.Mha2286IP | |
3295 | 211 aa hypothetical protein | |||
8955 | methyltransferase | |||
??? | M | M.MhaH23ORF2958P (100% identity) | GACNNNNNTTC | M.Mha2286ORF8960P |
8965 | S | S.PhaAI (100% identity) | GACNNNNNTTC | S.Mha2286ORF8960P |
8970 | R | Mhas183ORF4955P (100% identity) | GACNNNNNTTC | Mha2286ORF8960P |
8975 | glutamine-synthetase adenylyltransferase | |||
12105 | phosphatidylserine decarboxylase | |||
12110 | R | Pba12565ORF1955P (100% identity) | GNGAYNNNNNNNRTTG | Mha2286ORF12115P |
12115 | M | M.Pba12565ORF1955P (100% identity) | GNGAYNNNNNNNRTTG | M.Mha2286ORF12115P |
12120 | transcriptional regulator | |||
12125 | 55 aa hypothetical protein | |||
12130 | S | S2.MhaPORFGP (100% identity) | S1.Mha2286ORF12115P | |
12135 | integrase | |||
??? | S | S1.MhaPORFGP (100% identity) | GNGAYNNNNNNNRTTG | S2.Mha2286ORF12115P |
12145 | glutamate--cysteine ligase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
1335 | helicase IV | |||
??? | RM | MhaPORFCP (100% identity) | CTGAAG | Mha2286II |
1345 | M | M.Pba12565ORF12115P (100% identity) | CTGAAG | M.Mha2286II |
1350 | 183 aa hypothetical protein | |||
3155 | 52 aa hypothetical protein | |||
3160 | M | M.Pba12565ORF10370P (100% identity) | BA | M.Mha2286ORF3160P |
3165 | 812 aa hypothetical protein | |||
4875 | 61 aa hypothetical protein | |||
4880 | M | M.Pba12565ORF8745P (100% identity) | GCATC | M.Mha2286III |
4885 | R | Pba12565ORF8745P (100% identity) | GCATC | Mha2286IIIP |
4890 | 101 aa hypothetical protein | |||
5495 | pseudogene | |||
5500 | M | M.Pba12565ORF7080P (100% identity) | GATC | M.Mha2286ORF5500P |
5505 | 168 aa hypothetical protein | |||
7365 | 168 aa hypothetical protein | |||
7370 | M | M.Pba12565ORF7080P (100% identity) | GATC | M.Mha2286ORF7370P |
7375 | DNA helicase | |||
7515 | 35 aa hypothetical protein | |||
7520 | M | M.Mhas183ORF7435P (100% identity) | M.Mha2286ORF7520P | |
7525 | 85 aa hypothetical protein | |||
9660 | 348 aa hypothetical protein | |||
9665 | M | M.Pba12565ORF4290P (100% identity) | GATC | M.Mha2286ORF9665P |
9670 | 41 aa hypothetical protein | |||
10420 | transporter | |||
10425 | M | M.Pba12565ORF3610P (100% identity) | GATC | M.Mha2286ORF10425P |
10430 | 3-dehydroquinate synthase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
6710 | trimethylamine N-oxide reductase I catalytic | |||
??? | M | M.Pba12565ORF5515P (100% identity) | CTGGAG | M.Mha2286ORFAP |
??? | R | Pba12565ORF5515P (100% identity) | CTGGAG | Mha2286ORFAP |
6735 | type II citrate synthase | |||
8710 | DNA gyrase subunit B | |||
8715 | R | Pba12565ORF6755P (100% identity) | GTTAAT | Mha2286ORF8720P |
??? | M | M.Pba12565ORF6755P (100% identity) | GTTAAT | M.Mha2286ORF8720P |
8725 | 32 aa hypothetical protein |