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Putative Haemophilus parasuis ZJ0906 RM systems
Ref: Li,Y. et al. unpublished
REBASE ref # 16148
Complete sequence: 2,324,740 bp
GenBank #: CP005384
REBASE acronym: Hpa906
Org_num: 10729
All begin K756_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
3055 | apolipoprotein N-acyltransferase | |||
??? | R | HpaSH03ORF2530P (99% identity) | Hpa906ORF3080P | |
??? | S | S.Hpa15995ORF790P (97% identity) | S.Hpa906ORF3080P | |
3080 | M | M.HpaSH03ORF2530P (100% identity) | M.Hpa906ORF3080P | |
3085 | 48 aa hypothetical protein | |||
4485 | 240 aa hypothetical protein | |||
4490 | S | S2.HpaSH03ORF4015P (95% identity) | S1.Hpa906ORF4500P | |
4495 | HNH endonuclease | |||
4500 | M | M.HpaSHORF1954P (100% identity) | M.Hpa906ORF4500P | |
4505 | metal-dependent hydrolase | |||
??? | R | HpaSHORF1950P (62% identity) | Hpa906ORF4500P | |
4530 | 123 aa hypothetical protein | |||
4535 | 389 aa hypothetical protein | |||
4540 | HsdR family type I site-specific | |||
4545 | 165 aa hypothetical protein | |||
4550 | S | S3.HpaSH03ORF4015P (100% identity) | S2.Hpa906ORF4500P | |
4555 | transposase | |||
4775 | histidinol-phosphate aminotransferase | |||
4780 | R | HpaST41ORF935P (99% identity) | Hpa906ORF4795P | |
4785 | 343 aa hypothetical protein | |||
4790 | S | S.Gpa1807ORF6225P (66% identity) | S.Hpa906ORF4795P | |
4795 | M | M.Gpa1433ORF4860P (79% identity) | M.Hpa906ORF4795P | |
4800 | 3-phosphoserine/phosphohydroxythreonine | |||
10650 | tRNA uridine 5-carboxymethylaminomethyl | |||
10655 | S | S.Gpa170504ORF12025P (61% identity) | S.Hpa906ORF10680P | |
??? | R | GpaHPS7ORF8505P (99% identity) | Hpa906ORF10680P | |
10670 | 392 aa hypothetical protein | |||
10675 | 77 aa hypothetical protein | |||
10680 | M | M.HpaST41ORF7145P (99% identity) | M.Hpa906ORF10680P | |
10685 | 16S rRNA methyltransferase GidB | |||
11525 | 42 aa hypothetical protein | |||
11530 | M | M.HpaST41ORF7300P (100% identity) | M.Hpa906ORF11530P | |
11545 | S | S.Gpa1808ORF10990P (66% identity) | S.Hpa906ORF11530P | |
11550 | prophage protein | |||
11555 | prophage protein | |||
11560 | R | Hpa1401ORF6765P (98% identity) | Hpa906ORF11530P | |
11565 | 101 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
2145 | aspartate-semialdehyde dehydrogenase | |||
??? | RM | M.HpaSH03ORF1655P (80% identity) | Hpa906ORF2155P | |
2160 | ISRssp2, family IS1595 | |||
2660 | peptide chain release factor 1 | |||
2665 | M | M.HpaSH03ORF2165P (99% identity) | GCGC | M.Hpa906ORF2665P |
2670 | R | HpaNagORF782P (100% identity) | GCGC | Hpa906ORF2665P |
2675 | N5-glutamine S-adenosyl-L-methionine-dependent | |||
3850 | transcriptional regulator | |||
3855 | M | M.GpaXP11ORF2525P (100% identity) | M.Hpa906ORF3855P | |
3860 | 140 aa hypothetical protein | |||
4115 | 42 aa hypothetical protein | |||
4120 | M | M.Gpa412ORF8675P (100% identity) | M.Hpa906ORF4120P | |
4125 | 426 aa hypothetical protein | |||
5255 | 199 aa hypothetical protein | |||
5260 | M | M.HpaNagORF227P (100% identity) | CCGG | M.Hpa906ORF5260P |
5265 | condesin subunit E | |||
7265 | 3-dehydroquinate synthase | |||
7270 | M | M.HpaSHDamP (100% identity) | GATC | M.Hpa906ORF7270P |
7285 | adenylate kinase | |||
8090 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate | |||
8095 | M | M.HpaST41ORF8905P (100% identity) | CGCG | M.Hpa906ORF8095P |
8100 | R | HpaST41ORF8905P (100% identity) | CGCG | Hpa906ORF8095P |
8105 | D-lactate dehydrogenase | |||
8985 | 134 aa hypothetical protein | |||
8990 | RM | M1.Hpa318ORF5510P (100% identity) | Hpa906ORF8990P | |
8995 | 505 aa hypothetical protein | |||
8990 | type III restriction system methylase | |||
8995 | RM | M2.HpaSH03ORF7930P (100% identity) | Hpa906ORF8995P | |
9000 | restriction enzyme | |||
8995 | 505 aa hypothetical protein | |||
9000 | RM | HpaSH03ORF7930P (100% identity) | Hpa906ORF9000P | |
9005 | plasmid stability-like protein/nucleic | |||
9155 | 124 aa hypothetical protein | |||
9170 | M | M.HpaNagORF1948P (100% identity) | M.Hpa906ORF9170P | |
9175 | enoyl-CoA hydratase/carnithine racemase-like | |||
9530 | enoyl-CoA hydratase/carnithine racemase-like | |||
9535 | M | M.GpaXP11ORF6140P (94% identity) | BA | M.Hpa906ORF9535P |
9540 | 86 aa hypothetical protein | |||
10030 | 197 aa hypothetical protein | |||
??? | R | HpaSHORF1983P (99% identity) | AAGCTT | Hpa906ORF10045P |
10045 | M | M.HpaSH03ORF8550P (100% identity) | AAGCTT | M.Hpa906ORF10045P |
10050 | valyl-tRNA ligase | |||
11760 | ATPase | |||
11765 | RM | Hpa15995ORF225P (99% identity) | Hpa906ORF11765P | |
??? | S | S.HpaSH03ORF10290P (99% identity) | S.Hpa906ORF11765P | |
11790 | glutamate-1-semialdehyde aminotransferase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
20 | ketol-acid reductoisomerase | |||
??? | M | M.GpaHPS12ORF815P (95% identity) | M.Hpa906ORF25P | |
45 | R | HpaST41ORF5850P (99% identity) | Hpa906ORF25P | |
50 | filamentation induced by cAMP protein fic |