Lactobacillus plantarum 16 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Lactobacillus plantarum 16 RM systems
Ref: Crowley,S. unpublished
REBASE ref # 16223
| Sequence length: | GenBank #: | |
| Chromosome: | 3,044,678 bp | CP006033 |
| plasmid Lp16C: | 27,282 bp | CP006036 |
REBASE acronym: Lpl16
Org_num: 10725
All begin Lp16_, Lp16_C
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 46 | 166 aa hypothetical protein | |||
| 47 | R | LplJGS49ORF13150P (99% identity) | Lpl16ORF48P | |
| 48 | M | M.LplJGS49ORF13150P (98% identity) | M.Lpl16ORF48P | |
| 49 | S | S.Lco3535ORF15025P (61% identity) | S.Lpl16ORF48P | |
| 50 | TetR family transcriptional regulator | |||
| 757 | membrane alanine aminopeptidase (aminopeptidase | |||
| 758 | R | LplM19ORF4100P (100% identity) | Lpl16ORF759P | |
| 759 | M | M.LplV38ORF3570P (100% identity) | M.Lpl16ORF759P | |
| 760 | S | S1.LplV38ORF3570P (100% identity) | S1.Lpl16ORF759P | |
| 761 | integrase catalytic subunit | |||
| 762 | phage integrase | |||
| ??? | S | S2.LplYW11ORF11860P (100% identity) | S2.Lpl16ORF759P | |
| ??? | S | S3.LplA8ORF3540P (100% identity) | S3.Lpl16ORF759P | |
| 764 | transposase | |||
| 765 | S | S4.LplA8ORF3540P (100% identity) | S4.Lpl16ORF759P | |
| 766 | histidine phosphatase superfamily protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid Lp16C | ||||
| 10 | StbA-like protein | |||
| 11 | R | LplS58ORF275P (100% identity) | GATC | Lpl16ORF12P |
| 12 | M | M.LpaOF10ORF12795P (100% identity) | GATC | M.Lpl16ORF12P |
| 13 | resolvase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1435 | LysR family transcriptional regulator | |||
| 1436 | R | Lpr5300MrrP (100% identity) | Lpl16MrrP | |
| 1437 | NADP oxidoreductase coenzyme, F420-dependent | |||