Burkholderia cenocepacia K56-2Valvano |
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Putative Burkholderia cenocepacia K56-2Valvano RM systems
Ref: Brinkac,L.M. et al. unpublished
REBASE ref # 16076
Contig set: 7,750,255 bp
GenBank #: ALJA00000000 (NZ_ALJA00000000)
REBASE acronym: BceK56
Org_num: 10719
All begin BURCENK562V_, BURCENK562V_A, BURCENK562V_C, BURCENK562V_P
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 44 | R | BceK562VORFAP (33% identity) | BceK56ORF44P | |
| 45 | transposase | |||
| 2715 | DNA gyrase, B subunit | |||
| 2716 | R | BceK562VORFAP (90% identity) | BceK56ORF2719P | |
| 2717 | transposase | |||
| 8 | M | M.BceK562ORF10443P (100% identity) | M.BceK56ORF8P | |
| 9 | transposase | |||
| 10 | R | BceK56ORF44P (51% identity) | BceK56ORF8P | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2706 | tryptophan synthase, beta subunit | |||
| 2707 | M | M.Bcet4ORF24860P (100% identity) | GTWWAC | M.BceK56II |
| 2708 | tryptophan synthase, alpha subunit | |||
| 1416 | 848 aa hypothetical protein | |||
| ??? | M | M.BceK562VORFCP (100% identity) | M.BceK56ORFAP | |
| 1417 | toxin of toxin-antitoxin type 1 system domain | |||
| 102 | 153 aa hypothetical protein | |||
| 103 | M | M.BceK56ORF119P (94% identity) | A | M.BceK56ORF103P |
| 104 | 168 aa hypothetical protein | |||
| 50 | 266 aa hypothetical protein | |||
| 51 | M | M.BceK562VORFDP (100% identity) | GGCC | M.BceK56ORF51P |
| 52 | 227 aa hypothetical protein | |||
| 6769 | 848 aa hypothetical protein | |||
| ??? | M | M.BceK562VORFCP (100% identity) | M.BceK56ORFAP | |
| 6770 | toxin of toxin-antitoxin type 1 system domain | |||
| 118 | 168 aa hypothetical protein | |||
| 119 | M | M.BceK56ORF119P (94% identity) | A | M.BceK56ORF103P |
| 120 | 153 aa hypothetical protein | |||
| 3017 | tryptophan synthase, beta subunit | |||
| 3018 | M | M.Bcet4ORF24860P (100% identity) | GTWWAC | M.BceK56II |
| 3019 | tryptophan synthase, alpha subunit | |||
| 3068 | 266 aa hypothetical protein | |||
| 3069 | M | M.BceK562VORFDP (100% identity) | GGCC | M.BceK56ORF51P |
| 3070 | 227 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 273 | 48 aa hypothetical protein | |||
| 274 | R | BspEMB26ORF190P (100% identity) | CACAG | BceK56IP |
| 275 | M | M.BspEMB26ORF190P (99% identity) | CACAG | M.BceK56I |
| 2198 | 39 aa hypothetical protein | |||
| 2199 | M | M.BspEMB26ORF190P (99% identity) | CACAG | M.BceK56I |
| 2200 | R | BspEMB26ORF190P (100% identity) | CACAG | BceK56IP |
| 2201 | 127 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3065 | MFS transporter, metabolite:H+ symporter (MHS) | |||
| ??? | R | BceK562VMcrAP (100% identity) | BceK56McrAP | |
| 3067 | UDP-N-acetylglucosamine | |||
| 3596 | UDP-N-acetylglucosamine | |||
| 3597 | R | BceK562VMcrAP (100% identity) | BceK56McrAP | |
| 3598 | MFS transporter, metabolite:H+ symporter (MHS) | |||