Chthonomonas calidirosea T49 |
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Putative Chthonomonas calidirosea T49 RM systems
Ref: Lee,K.C.Y. et al. unpublished
REBASE ref # 16081
Complete sequence: 3,437,861 bp
GenBank #: HF951689
REBASE acronym: CcaT49
Org_num: 10708
All begin CCALI_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 448 | HNH endonuclease | |||
| 449 | M | M.PmeK22ORF413P (68% identity) | M.CcaT49ORF449P | |
| 450 | Predicted ATPase (AAA+ superfamily) | |||
| 622 | 210 aa hypothetical protein | |||
| 623 | M | M.AspTCORF13845P (85% identity) | GATC | M.CcaT49ORF623P |
| 624 | ASPIC and UnbV./Family description | |||
| 805 | RM | DauMPORF394P (62% identity) | CcaT49ORF805P | |
| 806 | 320 aa hypothetical protein | |||
| 956 | type III restriction enzyme, res subunit family | |||
| 958 | R | Cae14535ORF17590P (77% identity) | CYCGRG | CcaT49ORF959P |
| 959 | M | M.Cae14535ORF17590P (66% identity) | CYCGRG | M.CcaT49ORF959P |
| 960 | 56 aa hypothetical protein | |||
| 999 | Domain of unknown function (DUF4104) | |||
| 1000 | M | M.CspYORF2030P (65% identity) | GANTC | M.CcaT49ORF1000P |
| 1001 | radical SAM family uncharacterized protein | |||
| 1366 | 147 aa hypothetical protein | |||
| 1367 | R | CthTA2ORF835P (41% identity) | CAGCTG | CcaT49ORF1368P |
| 1368 | M | M.AthIMO1ORFKP (59% identity) | CAGCTG | M.CcaT49ORF1368P |
| 1369 | 273 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17 | Flagellar biosynthesis pathway, component FlhB | |||
| 18 | R | MspIT5ORF4855P (93% identity) | CcaT49ORF16P | |
| 19 | HEPN domain | |||
| 20 | 182 aa hypothetical protein | |||
| 21 | 245 aa hypothetical protein | |||
| 22 | Uncharacterized protein conserved in bacteria | |||
| 23 | M | M.MspIT5ORF4855P (41% identity) | M.CcaT49ORF16P | |
| 24 | CAAX amino terminal protease family | |||
| 955 | 67 aa hypothetical protein | |||
| 956 | R | Csp17003ORF16305P (36% identity) | CcaT49ORF956P | |
| 958 | type II site-specific deoxyribonuclease BsobI | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 455 | Predicted Zn-dependent hydrolases of the | |||
| 456 | R | GspM21MrrP (10% identity) | CcaT49Mrr2P | |
| 457 | 383 aa hypothetical protein | |||
| 808 | 95 aa hypothetical protein | |||
| 809 | R | Restriction endonuclease | CcaT49MrrP | |
| 810 | TIGR02436 family protein | |||