Haemophilus parasuis gx033 |
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Putative Haemophilus parasuis gx033 RM systems
Ref: Li,J. et al. Genome Announc 1 (3), E00224-13 (2013)
REBASE ref # 16000
Contig set: 2,127,786 bp
GenBank #: AOSU00000000 (NZ_AOSU00000000)
REBASE acronym: Hpa33
Org_num: 10657
All begin OE7_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5548 | S | S2.HpaSHORF1713P (90% identity) | S.Hpa33ORF5548P | |
| 5553 | prophage protein | |||
| 5558 | prophage protein | |||
| ??? | R | Gpa104ORFQP (99% identity) | Hpa33ORF5548P | |
| 5573 | 101 aa hypothetical protein | |||
| 10850 | R | HpaSHORF1950P (43% identity) | Hpa33ORF10850P | |
| 10865 | S | S.HpaSHORF1950P (59% identity) | S.Hpa33ORF10850P | |
| 10870 | S | S.Gpa104ORFMP (51% identity) | S.Hpa33ORF10870P | |
| ??? | R | HpaSH03ORF4050P (98% identity) | Hpa33ORF10940P | |
| 10940 | metal-dependent hydrolase | |||
| 5523 | 122 aa hypothetical protein | |||
| 5528 | M | M.HpaSHORF1713P (99% identity) | M.Hpa33ORF5528P | |
| 5533 | anticodon nuclease | |||
| 5538 | anticodon nuclease | |||
| 5543 | S | S1.HpaSHORF1713P (100% identity) | S.Hpa33ORF5528P | |
| 7189 | histidinol-phosphate aminotransferase | |||
| 7194 | R | Gpa70512ORF5180P (99% identity) | Hpa33ORF7204P | |
| 7199 | S | S.Gpa70512ORF5180P (100% identity) | S.Hpa33ORF7204P | |
| 7204 | M | M.HpaNagORF319P (100% identity) | M.Hpa33ORF7204P | |
| 7209 | 3-phosphoserine/phosphohydroxythreonine | |||
| 6315 | 48 aa hypothetical protein | |||
| 6320 | M | M.HpaMNHORF509P (100% identity) | M.Hpa33ORF6320P | |
| 6325 | S | S.Gpa104ORFJP (65% identity) | S.Hpa33ORF6320P | |
| 6330 | anticodon nuclease PrrC | |||
| 6335 | R | Gpa70512ORF6830P (100% identity) | Hpa33ORF6320P | |
| 6340 | apolipoprotein N-acyltransferase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10910 | RM | type I restriction-modification system | Hpa33ORF10910P | |
| 10915 | type IIS restriction enzyme protein | |||
| 10920 | HNH endonuclease | |||
| 10925 | M | M.HpaSHORF1954P (100% identity) | M.Hpa33ORF10910P | |
| 10910 | type I restriction-modification system | |||
| 10915 | S | S.Gpa70512ORF1215P (98% identity) | S.Hpa33ORF10915P | |
| 10920 | HNH endonuclease | |||
| 8354 | transposase | |||
| 8359 | M | M.Hpa29755ORF1292P (100% identity) | M.Hpa33ORF8359P | |
| 8364 | DNA methylase | |||
| 4301 | aspartate-semialdehyde dehydrogenase | |||
| ??? | M | HpaSHORF963P (100% identity) | M.Hpa33ORF4306P | |
| 4311 | 125 aa hypothetical protein | |||
| 5780 | ATPase | |||
| 5785 | RM | Gpa70512ORF10430P (100% identity) | Hpa33ORF5785P | |
| ??? | S | S.HpaSHORF1761P (68% identity) | S.Hpa33ORF5785P | |
| 5800 | glutamate-1-semialdehyde 2,1-aminomutase | |||
| 45 | 199 aa hypothetical protein | |||
| 50 | M | M.Gpa104ORFDP (99% identity) | CCGG | M.Hpa33ORF50P |
| 55 | condesin subunit E | |||
| 1507 | 3-dehydroquinate synthase | |||
| 1512 | M | M.HpaSHDamP (100% identity) | GATC | M.Hpa33ORF1512P |
| 1517 | Na+-dependent transporters of the SNF | |||
| 2277 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate | |||
| 2282 | M | M.HpaST41ORF8905P (100% identity) | CGCG | M.Hpa33ORF2282P |
| 2287 | R | HpaST41ORF8905P (100% identity) | CGCG | Hpa33ORF2282P |
| 2292 | D-lactate dehydrogenase | |||
| 6725 | transcriptional regulator | |||
| 6730 | M | M.HpaSHORF629P (100% identity) | M.Hpa33ORF6730P | |
| 6735 | prophage Lp2 protein 4 | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10568 | LysR family transcriptional regulator | |||
| 10573 | R | Gpa1818ORF11620P (99% identity) | Hpa33ORF10578P | |
| ??? | M | M.HpaSHORF1827P (100% identity) | M.Hpa33ORF10578P | |
| 10583 | ATPase (AAA+ superfamily) protein | |||
| 2368 | ketol-acid reductoisomerase | |||
| ??? | M | M.Gpa104ORFHP (41% identity) | M1.Hpa33ORFBP | |
| ??? | M | M.Gpa70512ORF9785P (100% identity) | M2.Hpa33ORFBP | |
| 2383 | R | Gpa70512ORF9785P (100% identity) | Hpa33ORFBP | |
| 2388 | filamentation induced by cAMP protein fic | |||
| 2102 | 101 aa hypothetical protein | |||
| ??? | M | M.Hpa318ORF4370P (97% identity) | M.Hpa33ORFAP | |
| 2117 | R | Gpa70512ORF2495P (100% identity) | Hpa33ORFAP | |
| 2122 | 3-oxoacyl-(acyl carrier protein) synthase I | |||