Clostridium pasteurianum BC1 |
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Putative Clostridium pasteurianum BC1 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 15980
Complete sequence: 4,990,707 bp
GenBank #: CP003261
REBASE acronym: CpaBC1
Org_num: 10606
All begin Clopa_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1783 | Kef-type K+ transport system, membrane | |||
| 1785 | M | M.CspOS126ORF14835P (90% identity) | M.CpaBC1ORF1785P | |
| 1786 | S | S.DspD25ORF4585P (49% identity) | S.CpaBC1ORF1785P | |
| 1787 | 143 aa hypothetical protein | |||
| 1788 | R | CspOS126ORF14835P (90% identity) | CpaBC1ORF1785P | |
| 1789 | pseudogene | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2245 | 62 aa hypothetical protein | |||
| 2246 | M | M.CspMORF2951P (87% identity) | M.CpaBC1ORF2246P | |
| 2247 | DNA/RNA helicase, superfamily II, SNF2 family | |||
| 2252 | 230 aa hypothetical protein | |||
| 2253 | R | Csp7243ORF1027P (38% identity) | CCGG | CpaBC1ORF2253P |
| 2256 | 144 aa hypothetical protein | |||
| 3020 | spermidine synthase | |||
| 3021 | M | M.CpaAIII (77% identity) | M.CpaBC1ORF3021P | |
| 3022 | delta-lactam-biosynthetic de-N-acetylase | |||
| 3143 | 46 aa hypothetical protein | |||
| 3144 | M | M.Hhi503ORF1267P (78% identity) | M.CpaBC1ORF3144P | |
| 3145 | 307 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2247 | DNA/RNA helicase, superfamily II, SNF2 family | |||
| 2248 | M | M.Ssp1787ORF6840P (67% identity) | M.CpaBC1ORF2248P | |
| 2249 | R | CspMORF2953P (89% identity) | CpaBC1ORF2248P | |
| 2250 | helicase family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3838 | 71 aa hypothetical protein | |||
| 3839 | R | CcaPORF590P (60% identity) | CpaBC1ORFAP | |
| 3840 | 69 aa hypothetical protein | |||