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Putative Neisseria gonorrhoeae MS11 RM systems
Ref: Ribeiro,F. et al. Genome Res. (2012) In press
REBASE ref # 15737
Sequence length: | GenBank #: | |
Chromosome: | 2,233,640 bp | CP003909 |
Chromosome: | (contig set) | AKCH00000000 |
REBASE acronym: NgoM
Org_num: 1858
All begin NGFG_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
557 | ADP-L-glycero-D-manno-heptose-6-epimerase | |||
558 | M | M.Ngos1291ORF7750P (100% identity) | GCANNNNNNNNTGC | M.NgoMORF558P |
559 | DNA-damage-inducible protein D | |||
560 | S | S.Ngos1291ORF7750P (100% identity) | GCANNNNNNNNTGC | S.NgoMORF558P |
561 | R | NgoMS11ORF4820P (100% identity) | GCANNNNNNNNTGC | NgoMORF558P |
562 | ATP-dependent Clp protease ATP-binding subunit | |||
1096 | recombination factor protein R | |||
1095 | R | NgoWLIP (99% identity) | GAGNNNNNTAC | NgoMORF1095P |
1094 | 77 aa hypothetical protein | |||
1093 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.NgoMORF1095P |
1092 | 186 aa hypothetical protein | |||
1091 | 280 aa hypothetical protein | |||
1090 | M | M.NgoNG250ORF4770P (100% identity) | GAGNNNNNTAC | M.NgoMORF1095P |
1088 | 3,4-dihydroxy-2-butanone 4-phosphate synthase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
143 | leucyl-tRNA synthetase | |||
144 | R | NgoPID18ORF231P (100% identity) | GATC | NgoMORF146P |
??? | M | M.NgoWOORF8P (100% identity) | GATC | M.NgoMORF146P |
147 | 151 aa hypothetical protein | |||
444 | phenylalanyl-tRNA synthetase alpha chain | |||
445 | V | V.NgoWSORF391P (100% identity) | V.NgoMORF446P | |
??? | M | M.NgoAXIIIP (100% identity) | M.NgoMORF446P | |
448 | R | Npo18661ORFHP (100% identity) | NgoMORF446P | |
449 | phenylalanyl-tRNA synthetase beta chain | |||
506 | 215 aa hypothetical protein | |||
507 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | NgoMORF507P |
508 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.NgoMORF507P |
509 | 140 aa hypothetical protein | |||
513 | uroporphyrinogen decarboxylase | |||
514 | H | H.Ngos1291ORF7560P (100% identity) | H.NgoMORF516P | |
515 | R | Ngos1291ORF7560P (100% identity) | GCSGC | NgoMORF516P |
516 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.NgoMORF516P |
517 | 39 aa hypothetical protein | |||
1123 | 3-isopropylmalate dehydrogenase | |||
1122 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | NgoMV |
1121 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.NgoMV |
1120 | 3-isopropylmalate dehydratase small subunit | |||
856 | anthranilate synthase component 1 | |||
855 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.NgoMIV |
854 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | NgoMIV |
853 | phosphoribosylaminoimidazole carboxylase, ATPase | |||
2389 | replication initiation factor | |||
2180 | V | V.Ngos1291ORF65P (100% identity) | V.NgoMORF2182P | |
2181 | R | NgoWSORF1801P (100% identity) | CCGG | NgoMORF2182P |
2182 | M | M.NgoMS11ORF8845P (100% identity) | CCGG | M.NgoMORF2182P |
2183 | 48 aa hypothetical protein | |||
2012 | UvrABC system protein A | |||
2013 | R | Ngos1291ORF260P (100% identity) | CCGCGG | NgoMIII |
2014 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.NgoMIII |
2015 | 137 aa hypothetical protein | |||
1706 | 375 aa hypothetical protein | |||
??? | R | NgoMS11ORF580P (100% identity) | GGCC | NgoMIIP |
1709 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.NgoMII |
1710 | ribosome-recycling factor | |||
2469 | 105 aa hypothetical protein | |||
1805 | R | NgoWSIIIP (100% identity) | GGTGA | NgoMVIII |
1806 | M | M1.Ngos1291II (100% identity) | GGTGA | M2.NgoMVIII |
2470 | M | M2.Ngos1291II (100% identity) | GGTGA | M1.NgoMVIIIP |
1809 | competence protein ComEA helix-hairpin-helix | |||
1895 | GTPase obg | |||
1894 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.NgoMI |
1893 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | NgoMI |
1892 | cysteinyl-tRNA synthetase | |||
Chromosome | ||||
??? | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.NgoMIII |
??? | R | Ngos1291ORF260P (100% identity) | CCGCGG | NgoMIII |
??? | M | M2.Ngos1291II (100% identity) | GGTGA | M1.NgoMVIIIP |
??? | M | M1.Ngos1291II (100% identity) | GGTGA | M2.NgoMVIII |
??? | R | NgoWSIIIP (100% identity) | GGTGA | NgoMVIII |
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1161 | L-lactate dehydrogenase | |||
1160 | R | NgoWSORF749P (100% identity) | GCAGA | NgoMORF1159P |
1159 | M | M.NgoMS11ORF5990P (100% identity) | GCAGA | M.NgoMORF1159P |
1158 | tRNA pseudouridine synthase B |