Xylella fastidiosa Dixon |
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Putative Xylella fastidiosa Dixon RM systems
Ref: Copeland,A. et al. unpublished
REBASE ref # 9425
Contig set: 2,622,328 bp
GenBank #: AAAL00000000 (NZ_AAAL00000000)
REBASE acronym: XfaD
Org_num: 5820
All begin XfasaDRAFT_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 906 | 136 aa hypothetical protein | |||
| 872 | M | M.XfaSyVAORF2573P (100% identity) | M.XfaDORF872P | |
| 873 | S | S.XfaSyVAORF2573P (100% identity) | S.XfaDORF872P | |
| ??? | R | XfaFORF11290P (100% identity) | XfaDORF872P | |
| 876 | 405 aa conserved hypothetical protein | |||
| 895 | Lysine exporter protein (LYSE/YGGA) | |||
| 880 | M | M.XfaY3CORF10835P (99% identity) | M.XfaDORF880P | |
| 893 | 89 aa hypothetical protein | |||
| ??? | S | S.XfaAORFC3441P (100% identity) | S.XfaDORF880P | |
| 882 | R | XfaAORFC3441P (100% identity) | XfaDORF880P | |
| 884 | N-6 DNA methylase:Type I | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2299 | 65 aa hypothetical protein | |||
| 1828 | M | M.XfaY3CORF8005P (100% identity) | CGTACG | M.XfaDORF1828P |
| 1829 | R | XfaY3CORF8005P (100% identity) | CGTACG | XfaDORF1828P |
| 1830 | 75 aa hypothetical protein | |||
| 1898 | 148 aa hypothetical protein | |||
| ??? | M | M.XfaY3CORF8440P (100% identity) | GCATGC | M.XfaDORF1899P |
| 1900 | R | XfaY3CORF8440P (100% identity) | GCATGC | XfaDORF1899P |
| 1902 | Fimbrial protein pilin | |||
| 1938 | DNA primase | |||
| 2316 | R | XfaRiv5ORF8515P (100% identity) | CCSGG | XfaDORF1939P |
| 1939 | M | M.XfaY3CORF8660P (100% identity) | CCSGG | M.XfaDORF1939P |
| 1940 | Tryptophan--tRNA ligase | |||
| 1970 | Helix-turn-helix motif | |||
| 1971 | M | M.XfaLM10ORF9845P (100% identity) | GCCGGC | M.XfaDORF1971P |
| 1972 | R | XfaLM10ORF9845P (100% identity) | GCCGGC | XfaDORF1971P |
| 1973 | 202 aa hypothetical protein | |||
| 1972 | 287 aa hypothetical protein | |||
| 1973 | M | M.XfaLM10ORF9855P (98% identity) | M.XfaDORF1973P | |
| 1974 | 231 aa conserved hypothetical protein | |||
| 2343 | 99 aa conserved hypothetical protein | |||
| 2194 | M | M.XfasORF2772P (100% identity) | M.XfaDORF2194P | |
| 2195 | Transposase, IS605 OrfB | |||