Escherichia coli STEC_DG131-3 |
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Putative Escherichia coli STEC_DG131-3 RM systems
Ref: Rasko,D. et al. unpublished
REBASE ref # 13962
Contig set: 5,298,033 bp
GenBank #: AFDV00000000 (NZ_AFDV00000000)
REBASE acronym: Eco1313
Org_num: 9911
All begin ECSTECDG1313_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 157 | integrase | |||
| 158 | M | M1.EcosA33III (100% identity) | M1.Eco1313ORF158P | |
| 159 | M | N-6 DNA Methylase family protein | M2.Eco1313ORF158P | |
| 160 | N-6 DNA methylase domain protein | |||
| 161 | S | S.EcoFHI37ORFAP (100% identity) | S.Eco1313ORF158P | |
| 162 | R | EcosA33IIIP (100% identity) | Eco1313ORF158P | |
| 163 | 135 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3139 | 51 aa hypothetical protein | |||
| 3143 | M | DNA methylase family protein | M.Eco1313ORF3143P | |
| 1635 | 76 aa hypothetical protein | |||
| 1636 | M | M.EcoSMBLORF10150P (100% identity) | M.Eco1313ORF1636P | |
| 1637 | transcriptional regulator, AraC family | |||
| 2033 | shiga-like toxin 2 subunit A | |||
| 2037 | M | M.Eco9076ORF4512P (100% identity) | M.Eco1313ORF2037P | |
| 2038 | 65 aa hypothetical protein | |||
| 5517 | 70 aa hypothetical protein | |||
| 5518 | M | M.Eco3665ORFBP (100% identity) | M.Eco1313ORF5518P | |
| 5519 | 61 aa hypothetical protein | |||
| 1424 | phage/conjugal plasmid C-4 type zinc finger | |||
| 1425 | M | M.EcoFHI37ORFEP (100% identity) | GATC | M.Eco1313ORF1425P |
| 1426 | bacteriophage replication gene A family protein | |||
| 982 | 71 aa hypothetical protein | |||
| 983 | M | M.EcoFHI37ORFBP (100% identity) | GATC | M.Eco1313ORF983P |
| 984 | 53 aa hypothetical protein | |||
| 4437 | ribulose-phosphate 3-epimerase | |||
| 4438 | M | DNA adenine methylase | GATC | M.Eco1313DamP |
| 4439 | protein damX | |||
| 4370 | bacterial regulatory protein, Fis family | |||
| 4371 | M | M.Ecoww7ORF17400P (100% identity) | ATGCAT | M.Eco1313ORF4371P |
| 4372 | 37 aa hypothetical protein | |||
| 2945 | carboxylate/Amino Acid/Amine Transporter family | |||
| ??? | V | V.SsoSE61DcmP (100% identity) | V.Eco1313DcmP | |
| 2947 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco1313DcmP |
| 2948 | HD domain protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | Eco1313ORF5467P (69% identity) | Eco1313ORF5492P | |
| 5492 | M | M.Eco4404ORFIP (77% identity) | M.Eco1313ORF5492P | |
| 5493 | relaxase/mobilization nuclease domain protein | |||
| ??? | M | M.Eco4404ORFIP (97% identity) | M.Eco1313ORF5467P | |
| ??? | R | Eco3317ORF29480P (99% identity) | Eco1313ORF5467P | |
| 5471 | 46 aa hypothetical protein | |||
| 1765 | BRO family, N-terminal domain protein | |||
| 1766 | R | EcoNP020ORF3722P (100% identity) | Eco1313ORF1767P | |
| ??? | M | M.EcoNP020ORF3722P (100% identity) | M.Eco1313ORF1767P | |
| 1769 | 290 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3662 | 45 aa hypothetical protein | |||
| 3663 | R | EcoWP2GmrSDP (96% identity) | Eco1313GmrSDP | |
| 3664 | phage Tail Collar domain protein | |||