Ruminococcus lactaris ATCC 29176 |
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Putative Ruminococcus lactaris ATCC 29176 RM systems
Ref: Sudarsanam,P. et al. unpublished
REBASE ref # 11443
Contig set: 2,729,735 bp
GenBank #: ABOU00000000 (NZ_ABOU00000000)
REBASE acronym: Rla
Org_num: 5487
All begin RUMLAC_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 739 | site-specific recombinase, phage integrase | |||
| 740 | R | Rla29176ORF11465P (86% identity) | RlaORF744P | |
| 741 | 149 aa hypothetical protein | |||
| 742 | 166 aa hypothetical protein | |||
| 743 | S | S.Vdi11831ORF721P (66% identity) | S.RlaORF744P | |
| 744 | M | M.Rla29176ORF11465P (100% identity) | M.RlaORF744P | |
| 745 | 343 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13 | 67 aa hypothetical protein | |||
| 14 | RM | RlaORF14P (100% identity) | ACACAG | RlaII |
| 15 | 60 aa hypothetical protein | |||
| 2663 | 124 aa hypothetical protein | |||
| 2664 | R | Rla29176ORF10685P (100% identity) | TGATCA | RlaORF2666P |
| 2665 | C | C.Rla29176ORF10685P (100% identity) | C.RlaORF2666P | |
| 2666 | M | M1.Rla29176ORF10685P (100% identity) | TGATCA | M.RlaORF2666P |
| 2667 | 176 aa hypothetical protein | |||
| 2666 | DNA adenine methylase | |||
| 2667 | M | M2.Rla29176ORF10685P (72% identity) | M.RlaORF2667P | |
| 2668 | 118 aa hypothetical protein | |||
| 649 | 62 aa hypothetical protein | |||
| 650 | M | C-5 cytosine-specific DNA methylase | GGNCC | M.RlaORF650P |
| 651 | 67 aa hypothetical protein | |||
| 1537 | 49 aa hypothetical protein | |||
| 1538 | M | M.Rla29176ORF815P (100% identity) | GCGC | M.RlaORF1538P |
| 1539 | 62 aa hypothetical protein | |||
| 1549 | 95 aa hypothetical protein | |||
| 1550 | M | M.Aga11188ORF1376P (26% identity) | GCGC | M.RlaORF1550P |
| 1551 | 184 aa hypothetical protein | |||
| 2185 | 78 aa hypothetical protein | |||
| ??? | R | Rla29176ORF6195P (100% identity) | CAATTG | RlaORF2189P |
| 2188 | C | C.Rla29176ORF6195P (100% identity) | C.RlaORF2189P | |
| 2189 | M | M.Rla29176ORF6195P (100% identity) | CAATTG | M.RlaORF2189P |
| 2190 | 221 aa hypothetical protein | |||
| 2208 | 609 aa hypothetical protein | |||
| 2209 | C | C.Rla29176ORF6055P (100% identity) | C.RlaIP | |
| 2210 | V | V.Rla29176ORF6055P (91% identity) | V.RlaIP | |
| 2211 | R | Rla29176ORF6085P (100% identity) | VCW | RlaI |
| 2212 | 955 aa hypothetical protein | |||
| 2216 | 311 aa hypothetical protein | |||
| 2217 | M | M.Rla29176ORF6055P (100% identity) | CCGG | M.RlaORF2217P |
| 2218 | DNA-directed DNA polymerase | |||