Escherichia coli TW09098 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli TW09098 RM systems
Ref: Eppinger,M. et al. Genome Announc 1 (2), E0013412 (2013)
REBASE ref # 15767
Contig set: 5,486,058 bp
GenBank #: AKLX00000000 (NZ_AKLX00000000)
REBASE acronym: Eco9098
Org_num: 10407
All begin ECTW09098_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 12 | endoribonuclease symE | |||
| 13 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco9098ORF14P |
| 14 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco9098ORF14P |
| 15 | R | EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | Eco9098ORF14P |
| 16 | 94 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5859 | yfcA protein | |||
| 5860 | M | M.SspPIBORF23080P (100% identity) | M.Eco9098ORF5860P | |
| 5861 | 41 aa hypothetical protein | |||
| 1952 | 65 aa hypothetical protein | |||
| ??? | M | M.EcosPA8ORF27255P (100% identity) | M.Eco9098ORF1954P | |
| 1957 | 54 aa hypothetical protein | |||
| 5433 | 65 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco9098ORF5434P | |
| 5436 | 114 aa hypothetical protein | |||
| 3513 | regulatory protein | |||
| 3514 | M | M.EspP079ORF2847P (100% identity) | GATC | M.Eco9098ORF3514P |
| 3515 | 70 aa hypothetical protein | |||
| 5747 | 41 aa hypothetical protein | |||
| 5748 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco9098ORF5748P | |
| 5749 | 73 aa hypothetical protein | |||
| 3484 | prophage repressor CI | |||
| 3485 | M | M.Sso1099I (100% identity) | CTGCAG | M.Eco9098ORF3485P |
| 3486 | R | Sso1099IP (100% identity) | CTGCAG | Eco9098ORF3485P |
| 3487 | 37 aa hypothetical protein | |||
| 2878 | 306 aa hypothetical protein | |||
| 2879 | V | V.EcosPA8DcmP (100% identity) | V.Eco9098DcmP | |
| 2880 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco9098DcmP |
| 2881 | 231 aa hypothetical protein | |||
| 5701 | ATP-dependent helicase | |||
| 5702 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco9098ORF5702P |
| 4594 | ribulose-phosphate 3-epimerase | |||
| 4595 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco9098DamP |
| 4596 | protein damX | |||
| 4487 | DNA-binding protein fis | |||
| 4488 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco9098ORF4488P |
| 4489 | 59 aa hypothetical protein | |||