Escherichia coli FRIK1996 |
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Putative Escherichia coli FRIK1996 RM systems
Ref: Eppinger,M. et al. Genome Announc 1 (2), E0013412 (2013)
REBASE ref # 15767
Contig set: 5,434,754 bp
GenBank #: AKKY00000000 (NZ_AKKY00000000)
REBASE acronym: Eco1996
Org_num: 10474
All begin ECFRIK1996_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 28 | endoribonuclease symE | |||
| 29 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco1996ORF30P |
| 30 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco1996ORF30P |
| 31 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco1996ORF30P |
| 32 | 94 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2992 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco1996ORF2992P |
| 2993 | ninB | |||
| 2024 | 65 aa hypothetical protein | |||
| 2025 | M | M.EcoZ1836ORF13250P (100% identity) | M.Eco1996ORF2025P | |
| 5981 | 83 aa hypothetical protein | |||
| 5982 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.Eco1996ORF5982P |
| 5983 | lexA DNA binding domain protein | |||
| 1962 | 65 aa hypothetical protein | |||
| 1963 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco1996ORF1963P | |
| 1966 | 34 aa hypothetical protein | |||
| 5672 | 41 aa hypothetical protein | |||
| 5673 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco1996ORF5673P | |
| 5674 | 73 aa hypothetical protein | |||
| 5619 | P4 integrase-like protein | |||
| 5620 | C | restriction modification protein | C.Eco1996ORF5622P | |
| 5621 | R | EcoS3ORF17765P (100% identity) | RGGNCCY | Eco1996ORF5622P |
| 5622 | M | M.EcoZ1836ORF24740P (100% identity) | RGGNCCY | M.Eco1996ORF5622P |
| 5623 | polarity suppression protein | |||
| 5637 | ATP-dependent helicase | |||
| 5638 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco1996ORF5638P |
| 4548 | ribulose-phosphate 3-epimerase | |||
| ??? | M | Dam methyltransferase with SUUR CDS | GATC | M.Eco1996DamP |
| 4550 | protein damX | |||
| 2854 | 306 aa hypothetical protein | |||
| 2855 | V | V.EcosPA8DcmP (100% identity) | V.Eco1996DcmP | |
| 2856 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco1996DcmP |
| 2857 | 231 aa hypothetical protein | |||
| 5371 | 65 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco1996ORF5372P | |
| 5374 | 114 aa hypothetical protein | |||
| 4441 | DNA-binding protein fis | |||
| 4442 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco1996ORF4442P |
| 4443 | 59 aa hypothetical protein | |||