Escherichia coli FRIK1990 |
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Putative Escherichia coli FRIK1990 RM systems
Ref: Eppinger,M. et al. Genome Announc 1 (2), E0013412 (2013)
REBASE ref # 15767
Contig set: 5,519,540 bp
GenBank #: AKLA00000000 (NZ_AKLA00000000)
REBASE acronym: EcoK1990
Org_num: 10434
All begin ECFRIK1990_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5820 | endoribonuclease symE | |||
| ??? | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoK1990ORF5822P |
| 5822 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoK1990ORF5822P |
| 5823 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoK1990ORF5822P |
| 5824 | 94 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3566 | M | M.SflN97ORF15810P (100% identity) | GATC | M.EcoK1990ORF3566P |
| 3567 | ninB | |||
| 6139 | 73 aa hypothetical protein | |||
| 6140 | M | 110 aa hypothetical protein | M.EcoK1990ORF6140P | |
| 1945 | 65 aa hypothetical protein | |||
| 1946 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoK1990ORF1946P | |
| 3058 | anti-repressor protein Ant | |||
| 3059 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoK1990ORF3059P |
| 3060 | ninB protein | |||
| 5484 | 65 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.EcoK1990ORF5485P | |
| 5487 | 109 aa hypothetical protein | |||
| 5955 | 41 aa hypothetical protein | |||
| 5956 | M | M.SflN92ORF24820P (100% identity) | M.EcoK1990ORF5956P | |
| 5957 | 73 aa hypothetical protein | |||
| 5766 | ATP-dependent helicase | |||
| 5767 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoK1990ORF5767P |
| 5737 | P4 integrase-like protein | |||
| ??? | C | C.EcoZ1836ORF24740P (100% identity) | CTAAGNNNNNCTTAG | C.EcoK1990ORF5740P |
| ??? | R | EcoS3ORF17765P (100% identity) | RGGNCCY | EcoK1990ORF5740P |
| 5740 | M | M.EcoZ1836ORF24740P (96% identity) | RGGNCCY | M.EcoK1990ORF5740P |
| 5741 | polarity suppression protein | |||
| 2933 | 306 aa hypothetical protein | |||
| 2934 | V | V.EcosPA8DcmP (100% identity) | V.EcoK1990DcmP | |
| 2935 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoK1990DcmP |
| 2936 | 231 aa hypothetical protein | |||
| 278 | 83 aa hypothetical protein | |||
| 279 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.EcoK1990ORF279P |
| 280 | lexA DNA binding domain protein | |||
| 4666 | ribulose-phosphate 3-epimerase | |||
| 4667 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoK1990DamP |
| 4668 | protein damX | |||
| 4559 | DNA-binding protein fis | |||
| 4560 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoK1990ORF4560P |
| 4561 | 37 aa hypothetical protein | |||