Escherichia coli EC4421 |
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Putative Escherichia coli EC4421 RM systems
Ref: Eppinger,M. et al. Genome Announc 1 (2), E0013412 (2013)
REBASE ref # 15767
Contig set: 5,315,793 bp
GenBank #: AKMF00000000 (NZ_AKMF00000000)
REBASE acronym: Eco4421
Org_num: 10479
All begin ECEC4421_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5549 | endoribonuclease symE | |||
| 5550 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco4421ORF5551P |
| 5551 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco4421ORF5551P |
| 5552 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco4421ORF5551P |
| 5553 | 94 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2888 | M | phage N-6-adenine-methyltransferase | GATC | M.Eco4421ORF2888P |
| 3224 | M | phage N-6-adenine-methyltransferase | GATC | M.Eco4421ORF3224P |
| ??? | RM | type II restriction enzyme, methylase subunit | Eco4421ORF5497P | |
| 1895 | 65 aa hypothetical protein | |||
| 1896 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco4421ORF1896P | |
| 1899 | 40 aa hypothetical protein | |||
| 5638 | 41 aa hypothetical protein | |||
| 5639 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco4421ORF5639P | |
| 5640 | 73 aa hypothetical protein | |||
| 2790 | 306 aa hypothetical protein | |||
| 2791 | V | V.EcosPA8DcmP (100% identity) | V.Eco4421DcmP | |
| 2792 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco4421DcmP |
| 2793 | 231 aa hypothetical protein | |||
| 5496 | ATP-dependent helicase | |||
| 5497 | RM | type II restriction enzyme, methylase subunit | Eco4421ORF5497P | |
| 4432 | ribulose-phosphate 3-epimerase | |||
| ??? | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco4421DamP |
| 4434 | protein damX | |||
| 4327 | DNA-binding protein fis | |||
| 4328 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco4421ORF4328P |
| 4329 | 59 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2889 | M | phage N-6-adenine-methyltransferase | GATC | M.Eco4421ORF2889P |