Pseudomonas putida CSV86 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Pseudomonas putida CSV86 RM systems
Ref: Phale,P.S. et al. Genome Announc 1 (1), E00234-12 (2013)
REBASE ref # 15643
Contig set: 6,469,780 bp
GenBank #: AMWJ00000000 (NZ_AMWJ00000000)
REBASE acronym: PpuCSV86
Org_num: 10366
All begin CSV86_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 28992 | group II intron-encoding maturase | |||
| 28997 | RM | PspJYQORF25465P (100% identity) | PpuCSV86ORF28997P | |
| 29002 | Sea12 | |||
| 4067 | 51 aa hypothetical protein | |||
| 4072 | V | V.CmeDORF112540P (78% identity) | V.PpuCSV86ORF4077P | |
| 4077 | M | M.CmeDORF112540P (86% identity) | M.PpuCSV86ORF4077P | |
| 4082 | 498 aa hypothetical protein | |||
| 6176 | 35 aa hypothetical protein | |||
| 6181 | M | M.PpuGM4FRORF32250P (98% identity) | M.PpuCSV86ORF6181P | |
| 6186 | reverse transcriptase | |||
| 2437 | 267 aa hypothetical protein | |||
| 2442 | M | C-5 cytosine-specific DNA methylase | M.PpuCSV86ORF2442P | |
| 8311 | 34 aa hypothetical protein | |||
| 8316 | M | M.PspHLS6ORF15335P (42% identity) | M.PpuCSV86ORF8316P | |
| 8526 | phage transcriptional regulator AlpA | |||
| 8531 | M | M.SstDN36ORF5585P (99% identity) | M.PpuCSV86ORF8531P | |
| 8536 | V | V.SstDN36ORF5585P (100% identity) | V.PpuCSV86ORF8531P | |
| 8541 | 485 aa hypothetical protein | |||
| 5362 | 158 aa hypothetical protein | |||
| ??? | M | M.PspDY1ORF9375P (72% identity) | M.PpuCSV86ORFAP | |
| 5367 | 88 aa hypothetical protein | |||
| 13855 | nucleoid-associated protein NdpA | |||
| 13860 | M | M.Pfl11706ORFFP (93% identity) | M.PpuCSV86ORF13860P | |
| 13865 | transcriptional regulator | |||