Escherichia coli J96 |
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Putative Escherichia coli J96 RM systems
Ref: Klein,E.A. and Gitai,Z. Genome Announc 1 (1), E00245-12 (2013)
REBASE ref # 15639
Contig set: 5,540,893 bp
GenBank #: ALIN00000000 (NZ_ALIN00000000)
REBASE acronym: EcoJ96
Org_num: 10359
All begin B185_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 24835 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.EcoJ96ORF24840P |
| 24840 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.EcoJ96ORF24840P |
| ??? | R | Msa17ORFC2P (100% identity) | AACNNNNNNGTGC | EcoJ96ORF24840P |
| 24850 | methylated adenine and cytosine restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22804 | 110 aa hypothetical protein | |||
| 22819 | M | M.EcosS3ORF15775P (100% identity) | M.EcoJ96ORF22819P | |
| 22824 | 986 aa hypothetical protein | |||
| 16860 | global DNA-binding transcriptional dual | |||
| 16865 | M | M.Ecos19ORF2295P (100% identity) | ATGCAT | M.EcoJ96ORF16865P |
| 16870 | 59 aa hypothetical protein | |||
| 12803 | cell division protein DamX | |||
| 12808 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoJ96DamP |
| 12813 | ribulose-phosphate 3-epimerase | |||
| 7087 | DMT superfamily transporter inner membrane | |||
| 7092 | V | V.EcoYP3DcmP (100% identity) | V.EcoJ96DcmP | |
| 7097 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoJ96DcmP |
| 7102 | hydrolase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | endonuclease R Type I restriction enzyme | |||
| 24850 | R | SenHNK130MrrP (100% identity) | EcoJ96MrrP | |
| 24855 | GTP-binding protein YjiA | |||