Escherichia coli K-12 substr. MG1655 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli K-12 substr. MG1655 RM systems
Ref: Ribeiro,F.J. et al. Genome Res. 22 (11), 2270-2277 (2012)
REBASE ref # 15737
| Sequence length: | GenBank #: | |
| Chromosome: | 372,438 bp | U18997 |
| chromosome MG1655: | 4,625,146 bp | LR881938 |
REBASE acronym: EcoK
Org_num: 1260
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome MG1655 | ||||
| ??? | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.Eco1655I |
| ??? | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.Eco1655I |
| ??? | R | Msa17ORFC2P (100% identity) | AACNNNNNNGTGC | Eco1655IP |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | DNA-binding transcriptional regulator Fis | |||
| ??? | M | M.EcoJ53KORF5120P (100% identity) | ATGCAT | M.EcoKORFAP |
| ??? | 59 aa hypothetical protein BvCmsA139A_01858 | |||
| ??? | DNA adenine methylase | |||
| ??? | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoKDam |
| ??? | cell division protein DamX | |||
| chromosome MG1655 | ||||
| ??? | V | V.SflFF64DcmP (100% identity) | CCWGG | V.Eco1655DcmP |
| ??? | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco1655Dcm |
| ??? | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.Eco1655ORF6040P |
| ??? | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco1655Dam |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome MG1655 | ||||
| ??? | R | SsoSE61ORF22640P (100% identity) | YCGR | Eco1655McrAP |
| ??? | R | Msa17McrC2P (100% identity) | Eco1655McrCP | |
| ??? | R | SenHNK130McrBP (100% identity) | Eco1655McrBP | |
| ??? | R | SenHNK130MrrP (100% identity) | Eco1655MrrP | |