Crocosphaera watsonii WH 8501 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Crocosphaera watsonii WH 8501 RM systems
Ref:
REBASE ref # 9425
GenBank #: AADV00000000 (NZ_AADV00000000)
REBASE acronym: CwaWH
Org_num: 4940
All begin CwatDRAFT_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5257 | Peptidase M52, hydrogen uptake protein | |||
| 5972 | S | S.Bfe14578ORFAP (44% identity) | S.CwaWHORF5967P | |
| 5971 | 115 aa conserved hypothetical protein | |||
| 5970 | Protein of unknown function DUF433 | |||
| ??? | M | M.MteBC008ORF34665P (73% identity) | M.CwaWHORF5967P | |
| 5966 | type I restriction-modification enzyme R | |||
| 5965 | R | Cpa267ORF26020P (59% identity) | CwaWHORF5967P | |
| 5964 | Protein of unknown function DUF29 | |||
| 4921 | Radical SAM | |||
| 5166 | S | S.Mae44ORF1671P (40% identity) | S.CwaWHORF5166P | |
| 4923 | MECDP-synthase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1214 | M | DNA methylase N-4/N-6 | ATGCAT | M.CwaWHORF1214P |
| 1215 | R | Csp68KIII (86% identity) | ATGCAT | CwaWHORF1214P |
| 1216 | similar to thioesterase | |||
| ??? | RM | MspGI1ORFFP (29% identity) | CwaWHORFAP | |
| 728 | Protein of unknown function UPF0227 | |||
| 727 | M | M.Csp68KORF1767P (80% identity) | GTMKAC | M.CwaWHORF727P |
| 726 | 297 aa hypothetical protein | |||
| 3979 | Protein of unknown function UPF0004:tRNA-i(6)A37 | |||
| 3980 | M | similar to Type I restriction-modification | M.CwaWHORF3980P | |
| 3981 | 219 aa hypothetical protein | |||
| 3982 | R | MaeM03ORF7610P (78% identity) | CwaWHORF3980P | |
| 4020 | 383 aa Conserved hypothetical protein 423 | |||
| 4677 | Pentapeptide repeat | |||
| 4860 | M | 114 aa hypothetical protein | GGWCC | M.CwaWHORF4860P |
| 4859 | Heme oxygenase (decyclizing) | |||
| 4544 | 97 aa hypothetical protein | |||
| ??? | RM | MaeFD4ORF25620P (74% identity) | CwaWHORF4601P | |
| 4600 | 182 aa hypothetical protein | |||
| 5159 | Fe-S metabolism associated SufE | |||
| 4936 | M | M.Csp68KORF2327P (75% identity) | GATC | M.CwaWHORF4936P |
| ??? | R | Type II site-specific deoxyribonuclease | GATC | CwaWHORF4936P |
| 5158 | 226 aa hypothetical protein | |||
| 5133 | 508 aa hypothetical protein | |||
| 5132 | M | M.Csp68KORF4468P (80% identity) | M.CwaWHORF5132P | |
| 5131 | 215 aa conserved hypothetical protein | |||
| 5454 | Transposase IS66 | |||
| 5810 | RM | Afl14aORF2440P (47% identity) | CwaWHORF5810P | |
| 5808 | Cyclic nucleotide-binding | |||
| 5486 | DNA repair protein RadA | |||
| 5487 | R | Csp8802ORF3922P (41% identity) | ACRYGT | CwaWHORF5771P |
| 5771 | M | M.Csp8802ORF3922P (25% identity) | ACRYGT | M.CwaWHORF5771P |
| 5770 | transposase | |||
| 6564 | Amidase | |||
| 6563 | R | TerORF4525P (63% identity) | CTGCAG | CwaWHORF6562P |
| 6562 | C-5 cytosine-specific DNA methylase | |||
| 4183 | Coproporphyrinogen oxidase | |||
| ??? | M | M.Cwa3ORF2249P (97% identity) | RGCGCY | M.CwaWHORF4184P |
| 4217 | Pentapeptide repeat | |||
| 3868 | 213 aa hypothetical protein | |||
| 3872 | M | M.Cwa3ORF2109P (59% identity) | CCCGT | M.CwaWHORF3872P |
| 3871 | 89 aa hypothetical protein | |||
| 2012 | 2-isopropylmalate synthase | |||
| 2013 | R | Cwa3ORF4123P (98% identity) | GGWCC | CwaWHORF2014P |
| 2014 | M | M.Cwa3ORF4123P (83% identity) | GGNCC | M.CwaWHORF2014P |
| 2019 | CheW-like protein | |||
| 1640 | C-5 cytosine-specific DNA methylase | |||
| ??? | R | CstHL69ORFRP (33% identity) | GGYRCC | CwaWHORF1640P |
| 1636 | 172 aa hypothetical protein | |||
| 840 | 217 aa hypothetical protein | |||
| 847 | M | M.Cwa3ORF5123P (99% identity) | GCCGGC | M.CwaWHORF847P |
| 846 | Peptidase U62, modulator of DNA gyrase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1867 | DNA polymerase, beta-like region | |||
| 1859 | R | LboDg5MrrP (75% identity) | CwaWHMrrP | |
| 1866 | 110 aa hypothetical protein | |||
| 3681 | Anion-transporting ATPase | |||
| ??? | R | CspCCYMcrCP (77% identity) | CwaWHMcrCP | |
| 3701 | R | Psp001McrBP (36% identity) | CwaWHMcrBP | |
| 3700 | similar to Uncharacterized conserved protein | |||