Bartonella tribocorum CIP 105476 |
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Putative Bartonella tribocorum CIP 105476 RM systems
Ref: Saenz,H.L. et al. Nat. Genet. 39 (12), 1469-1476 (2007)
REBASE ref # 10373
| Sequence length: | GenBank #: | |
| Chromosome: | 2,619,061 bp | AM260525 (NC_010161) |
| plasmid Btr: | 23,343 bp | AM260524 (NC_010160) |
REBASE acronym: BtrCIP
Org_num: 4953
All begin BT_, BT_r, pBT01_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 162 | 133 aa hypothetical protein | |||
| 164 | RM | Btr166ORF145P (99% identity) | BtrCIPORF164P | |
| 165 | phage-related protein | |||
| 306 | phage-related lysozyme | |||
| 307 | M | M.Btr166ORF275P (100% identity) | M.BtrCIPORF307P | |
| 309 | phage-related integrase | |||
| 363 | 124 aa hypothetical protein | |||
| 364 | M | M.Btr166ORF330P (100% identity) | M.BtrCIPORF364P | |
| 365 | 173 aa hypothetical protein predicted by | |||
| 454 | phage-related protein | |||
| ??? | RM | Btr166ORF419P (87% identity) | BtrCIPORF455P | |
| 457 | 538 aa conserved hypothetical protein | |||
| 539 | 133 aa conserved hypothetical protein | |||
| 541 | RM | Btr166ORF504P (100% identity) | BtrCIPORF541P | |
| 542 | phage-related protein | |||
| 1005 | phage-related protein | |||
| 1006 | RM | Btr166ORF945P (99% identity) | BtrCIPORF1006P | |
| 1008 | 133 aa hypothetical protein | |||
| 1020 | phage-related protein | |||
| 1021 | RM | Btr166ORF959P (77% identity) | BtrCIPORF1021P | |
| 1023 | 495 aa conserved hypothetical protein | |||
| 1034 | phage-related protein | |||
| 1035 | RM | Btr166ORF972P (100% identity) | BtrCIPORF1035P | |
| 1036 | hemolysin activator protein precursor | |||
| 1051 | 495 aa conserved hypothetical protein | |||
| 1053 | RM | BtrCIPORF1064P (100% identity) | BtrCIPORF1053P | |
| 1054 | phage-related protein | |||
| 1063 | phage-related protein | |||
| 1064 | RM | BtrCIPORF1053P (100% identity) | BtrCIPORF1064P | |
| 1066 | 316 aa conserved hypothetical protein | |||
| 1073 | phage-related integrase | |||
| 1074 | M | M.Btr166ORF1008P (100% identity) | M.BtrCIPORF1074P | |
| 1075 | 72 aa conserved hypothetical protein | |||
| 1078 | 310 aa conserved hypothetical membrane protein | |||
| 1080 | RM | Btr166ORF1015P (98% identity) | BtrCIPORF1080P | |
| 1082 | 495 aa conserved hypothetical protein | |||
| 1103 | phage-related protein | |||
| 1105 | RM | Btr166ORF1037P (100% identity) | BtrCIPORF1105P | |
| 1107 | 133 aa hypothetical protein | |||
| 1217 | NADH dehydrogenase I chain A | |||
| 1218 | M | M.BtrCIPORF2603P (100% identity) | M.BtrCIPORF1218P | |
| 1219 | 327 aa hypothetical prophage protein | |||
| 1263 | 62 aa hypothetical protein | |||
| 1264 | M | M.BtrCIPORF2603P (100% identity) | M.BtrCIPORF1264P | |
| 1265 | 327 aa hypothetical prophage protein | |||
| 1382 | transport transmembrane protein | |||
| 1383 | M | M.BtrCIPORF2603P (100% identity) | M.BtrCIPORF1383P | |
| 1384 | 330 aa hypothetical prophage protein | |||
| 1800 | ATPase component of iron transport system | |||
| 1801 | M | M.BtrCIPORF2603P (100% identity) | M.BtrCIPORF1801P | |
| 1802 | 330 aa hypothetical prophage protein | |||
| 1844 | 183 aa hypothetical protein | |||
| 1845 | M | M.BtrCIPORF2603P (100% identity) | M.BtrCIPORF1845P | |
| 1846 | 330 aa hypothetical prophage protein | |||
| 2487 | 221 aa conserved hypothetical protein | |||
| 2491 | RM | Btr166ORF2159P (100% identity) | BtrCIPORF2491P | |
| 2493 | ATP-binding protein of ABC transporter | |||
| 2601 | periplasmic substrate-binding protein of | |||
| 2603 | M | M.BtrCIPORF1845P (100% identity) | M.BtrCIPORF2603P | |
| 2604 | 330 aa hypothetical prophage protein | |||
| plasmid Btr | ||||
| 13 | 166 aa hypothetical protein predicted by | |||
| 14 | RM | Btr166ORF2347P (96% identity) | BtrCIPORF14P | |
| 15 | 539 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1178 | 312 aa conserved hypothetical protein | |||
| 1179 | R | Btr166ORF1115P (100% identity) | BtrCIPORF1180P | |
| 1180 | M | M.Btr166ORF1115P (100% identity) | M.BtrCIPORF1180P | |
| 1181 | 133 aa conserved hypothetical protein | |||
| 1735 | 358 aa hypothetical protein | |||
| 1738 | M | M.Btr166ORF1637P (100% identity) | M.BtrCIPORF1738P | |
| 1739 | R | BtrCIPORF1929P (100% identity) | BtrCIPORF1738P | |
| 2 | pseudogene | |||
| 1928 | 453 aa hypothetical protein | |||
| 1929 | M | M.Btr166ORF1803P (100% identity) | M.BtrCIPORF1929P | |
| 1930 | R | BtrCIPORF1738P (100% identity) | BtrCIPORF1929P | |
| 5 | pseudogene | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 667 | 231 aa conserved hypothetical protein | |||
| 668 | M | M.Btr166ORF625P (100% identity) | GANTC | M.BtrCIPORF668P |
| 669 | A/G-specific adenine glycosylase MutY | |||