Vibrio cholerae HE-45 |
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Putative Vibrio cholerae HE-45 RM systems
Ref: Eppinger,M. et al. unpublished
REBASE ref # 15468
Contig set: 4,125,202 bp
GenBank #: ALED00000000 (NZ_ALED00000000)
REBASE acronym: VchHE45
Org_num: 9965
All begin VCHE45_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 33 | relB antitoxin family protein | |||
| 34 | M | M.VchO1AORFDP (100% identity) | M.VchHE45ORF34P | |
| 35 | S | S.VchO1AORFDP (100% identity) | S.VchHE45ORF34P | |
| 36 | R | VchO1AORFDP (100% identity) | VchHE45ORF34P | |
| 37 | 184 aa hypothetical protein | |||
| 322 | DNA binding , excisionase family domain protein | |||
| ??? | R | Vfl942ORF10P (100% identity) | VchHE45ORF324P | |
| ??? | M | M.VvuYORF266P (100% identity) | M.VchHE45ORF324P | |
| 325 | S | S.Vfl942ORF10P (100% identity) | S.VchHE45ORF324P | |
| 326 | 265 aa hypothetical protein | |||
| 2626 | 218 aa hypothetical protein | |||
| 2627 | S | S.Vca502ORF24360P (44% identity) | S.VchHE45ORF2628P | |
| 2628 | M | M.VroAM7ORF46650P (95% identity) | M.VchHE45ORF2628P | |
| 2629 | R | Vfl8658ORFAP (97% identity) | VchHE45ORF2628P | |
| 2630 | sigma-54 interaction domain protein | |||
| 970 | restriction endonuclease family protein | |||
| 971 | R | Vsp1107ORF15190P (100% identity) | VchHE45ORF975P | |
| 972 | S | S.Vsp1107ORF15190P (100% identity) | S.VchHE45ORF975P | |
| 973 | 565 aa hypothetical protein | |||
| 974 | 291 aa hypothetical protein | |||
| 975 | M | M.Vsp1107ORF15190P (100% identity) | M.VchHE45ORF975P | |
| 976 | prophage CP4-57 integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2618 | transposase family protein | |||
| 2619 | M | M.Vch98481ORFAP (98% identity) | M.VchHE45ORF2619P | |
| 2620 | 474 aa hypothetical protein | |||
| 3612 | ribulose-phosphate 3-epimerase | |||
| 3613 | M | M.VspNIH41DamP (100% identity) | GATC | M.VchHE45DamP |
| 3614 | sporulation related domain protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 940 | membrane protein | |||
| 941 | R | VchL1271ORFBP (100% identity) | VchHE45ORF941P | |
| 942 | 75 aa hypothetical protein | |||
| 969 | DNA binding , excisionase family domain protein | |||
| 970 | R | Vsp1107Mrr2P (100% identity) | VchHE45Mrr2P | |
| 971 | type III restriction enzyme, res subunit | |||