Vibrio cholerae HE-16 |
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Putative Vibrio cholerae HE-16 RM systems
Ref: Eppinger,M. et al. unpublished
REBASE ref # 15468
Contig set: 3,905,537 bp
GenBank #: ALEB00000000 (NZ_ALEB00000000)
REBASE acronym: VchHE16
Org_num: 9963
All begin VCHE16_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 862 | restriction endonuclease family protein | |||
| 863 | R | Vsp1107ORF15190P (99% identity) | VchHE16ORF867P | |
| 864 | S | S.Vsp1107ORF15190P (100% identity) | S.VchHE16ORF867P | |
| 865 | 565 aa hypothetical protein | |||
| 866 | 291 aa hypothetical protein | |||
| 867 | M | M.Vsp1107ORF15190P (100% identity) | M.VchHE16ORF867P | |
| 868 | prophage CP4-57 integrase | |||
| 115 | 238 aa hypothetical protein | |||
| 116 | R | VchVChf7ORFDP (98% identity) | VchHE16ORF120P | |
| 117 | 196 aa hypothetical protein | |||
| 118 | recF/RecN/SMC N terminal domain protein | |||
| 119 | S | S.BdeJL63ORFGP (79% identity) | S.VchHE16ORF120P | |
| 120 | M | M.Spu10738I (93% identity) | M.VchHE16ORF120P | |
| 121 | restriction modification system DNA | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3302 | ribulose-phosphate 3-epimerase | |||
| 3303 | M | M.Vsp2425DamP (100% identity) | GATC | M.VchHE16ORF3303P |
| 3304 | sporulation related domain protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 861 | DNA binding , excisionase family domain protein | |||
| 862 | R | Vsp1107Mrr2P (97% identity) | VchHE16MrrP | |
| 863 | type III restriction enzyme, res subunit | |||