Methanomethylovorans hollandica DSM 15978 |
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Putative Methanomethylovorans hollandica DSM 15978 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 15416
| Sequence length: | GenBank #: | |
| Chromosome: | 2,428,904 bp | CP003362 |
| plasmid pMETHO01: | 285,109 bp | CP003363 |
REBASE acronym: Mho15978
Org_num: 9887
All begin Metho_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 316 | PAS domain S-box | |||
| 317 | M | M.MmaTMAORF27060P (89% identity) | M.Mho15978ORF317P | |
| 318 | NADPH-dependent FMN reductase | |||
| 319 | pseudogene | |||
| 320 | S | S.MbuDORF506P (52% identity) | S.Mho15978ORF317P | |
| 321 | transcriptional regulator with HTH | |||
| 322 | R | MmeMM1ORF1356P (81% identity) | Mho15978ORF317P | |
| 323 | DNA modification methylase | |||
| 632 | looped-hinge helix DNA binding domain, AbrB | |||
| 633 | M | M.MbaCM1ORF2882P (85% identity) | M.Mho15978ORF633P | |
| 634 | Protein of unknown function (DUF1016) | |||
| 635 | TIGR02391 family protein | |||
| 636 | S | S1.Psp1480ORF8930P (38% identity) | S.Mho15978ORF633P | |
| 637 | 219 aa hypothetical protein | |||
| 638 | 236 aa hypothetical protein | |||
| 639 | R | MbaCM1ORF2882P (79% identity) | Mho15978ORF633P | |
| 640 | 114 aa hypothetical protein | |||
| 1312 | metal-dependent hydrolase, beta-lactamase | |||
| 1314 | M | M.MhoHB1ORF3128P (95% identity) | M.Mho15978ORF1314P | |
| 1315 | 82 aa hypothetical protein | |||
| 1316 | ORF6N domain-containing protein | |||
| 1317 | S | S.UarANMEORFJP (47% identity) | S.Mho15978ORF1314P | |
| 1318 | 183 aa hypothetical protein | |||
| 1319 | 274 aa hypothetical protein | |||
| 1320 | virulence protein | |||
| 1321 | 83 aa hypothetical protein | |||
| 1322 | R | MsiC2JORF2142P (93% identity) | Mho15978ORF1314P | |
| 1323 | CRISPR-associated endonuclease Cas1 | |||
| 1366 | Domain of unknown function | |||
| 1367 | M | M.MspKolORF978P (84% identity) | M.Mho15978ORF1367P | |
| 1368 | S | S.LalTS1ORF3865P (44% identity) | S.Mho15978ORF1367P | |
| 1369 | transcriptional regulator with HTH | |||
| 1370 | R | MmaGORF2294P (84% identity) | Mho15978ORF1367P | |
| 1371 | metal-dependent hydrolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 322 | helicase, type I site-specific | |||
| 323 | M | M.Mps15ORF1336P (61% identity) | M.Mho15978ORF323P | |
| 324 | 326 aa hypothetical protein | |||
| 1390 | 105 aa hypothetical protein | |||
| 1391 | RM | Mps15ORF148BP (55% identity) | Mho15978ORF1391BP | |
| 1392 | 147 aa hypothetical protein | |||
| 1393 | transcriptional regulator with HTH | |||
| 1394 | RM | Mps15ORF148AP (83% identity) | Mho15978ORF1391AP | |
| 1395 | 1187 aa hypothetical protein | |||
| 2383 | nicotinate-nucleotide pyrophosphorylase | |||
| 2384 | RM | Mmazm15ORF7525P (74% identity) | Mho15978ORF2384P | |
| 2385 | acetate--CoA ligase | |||
| plasmid pMETHO01 | ||||
| 2700 | pseudogene | |||
| 2701 | M | DNA-methyltransferase Dcm | M.Mho15978ORF2701P | |
| 2702 | 98 aa hypothetical protein | |||
| 2717 | 122 aa hypothetical protein | |||
| 2718 | M | M1.CklORF3292P (33% identity) | M.Mho15978ORF2718P | |
| 2719 | 155 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pMETHO01 | ||||
| 2582 | 245 aa hypothetical protein | |||
| 2583 | M | M.PmeBin199ORFAP (44% identity) | M.Mho15978ORF2583P | |
| 2584 | R | Nar2447ORF7200P (69% identity) | Mho15978ORF2583P | |
| 2585 | 440 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1713 | copper ion binding protein | |||
| 1714 | R | Mzh4017MrrP (36% identity) | Mho15978MrrP | |
| 1715 | thioredoxin | |||