Desulfitobacterium dichloroeliminans LMG P-21439 |
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Putative Desulfitobacterium dichloroeliminans LMG P-21439 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 15341
Complete sequence: 3,624,449 bp
GenBank #: CP003344
REBASE acronym: Ddi21439
Org_num: 9786
All begin Desdi_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 307 | restriction endonuclease S subunit | |||
| 308 | M | M.DspTolMORF5695P (91% identity) | M.Ddi21439ORF307P | |
| 309 | virulence protein | |||
| 310 | S | S.Fbazrk13ORF3410P (35% identity) | S.Ddi21439ORF307P | |
| 311 | R | DspTolMORF5695P (89% identity) | Ddi21439ORF307P | |
| 312 | ATPase | |||
| 1205 | transcriptional regulator | |||
| 1206 | R | Chu14427ORF40720P (97% identity) | Ddi21439ORF1209P | |
| 1207 | S | S.TspSWB20ORF2428P (64% identity) | S.Ddi21439ORF1209P | |
| 1208 | 367 aa hypothetical protein | |||
| 1209 | M | M.Chu14427ORF40720P (98% identity) | M.Ddi21439ORF1209P | |
| 1210 | protein encoded in hypervariable junctions of | |||
| 1450 | type I restriction modification DNA specificity | |||
| 1451 | R | Psp3084ORF7285P (91% identity) | Ddi21439ORF1454P | |
| 1452 | virulence protein | |||
| 1453 | S | S1.DspTolMORF10280P (55% identity) | S.Ddi21439ORF1454P | |
| 1454 | M | M.Abu103574ORF5020P (91% identity) | M.Ddi21439ORF1454P | |
| 1455 | antirepressor regulating drug resistance | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 121 | 180 aa hypothetical protein | |||
| 122 | M | M2.EspM450ORFCP (54% identity) | M.Ddi21439ORF122P | |
| 123 | DNA/RNA helicase, superfamily II | |||
| 1274 | 108 aa hypothetical protein | |||
| 1275 | M | M.Dgi7213ORF3579P (91% identity) | M.Ddi21439ORF1275P | |
| 1276 | 193 aa hypothetical protein | |||
| 1340 | 186 aa hypothetical protein | |||
| 1341 | M | M.DspDCMORF13980P (92% identity) | M.Ddi21439ORF1341P | |
| 1342 | 89 aa hypothetical protein | |||
| 1687 | Uncharacterized protein family (UPF0236) | |||
| 1701 | C | C.EspMGS26ORFDP (75% identity) | C.Ddi21439ORF1702P | |
| 1702 | M | M.EacI (76% identity) | GGATC | M.Ddi21439ORF1702P |
| 1703 | R | ErhZJORF920P (78% identity) | GGATC | Ddi21439ORF1702P |
| 1704 | 227 aa hypothetical protein | |||
| 1709 | 67 aa hypothetical protein | |||
| 1710 | M | M.DspDCMORF1045P (94% identity) | M.Ddi21439ORF1710P | |
| 1711 | 144 aa hypothetical protein | |||
| 1732 | 134 aa hypothetical protein | |||
| 1733 | M | M.DspDCMORF1175P (86% identity) | M.Ddi21439ORF1733P | |
| 1734 | 88 aa hypothetical protein | |||
| 1789 | cobalt transport protein ATP-binding subunit | |||
| 1791 | M | M.DhaDHORF24490P (58% identity) | M.Ddi21439ORF1791P | |
| 1792 | pseudogene | |||
| 3339 | DGQHR domain-containing protein | |||
| 3340 | M | M.PpoR531ORF2337P (59% identity) | GATC | M.Ddi21439ORF3340P |
| 3341 | 45 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 302 | 96 aa hypothetical protein | |||
| 303 | R | CbeNMrrP (69% identity) | Ddi21439MrrP | |
| 304 | glycopeptide antibiotics resistance protein | |||
| 322 | 354 aa hypothetical protein | |||
| 323 | R | GTPase subunit of restriction endonuclease | Ddi21439McrB2P | |
| 324 | 599 aa hypothetical protein | |||
| 1308 | transcriptional regulator, effector-binding | |||
| 1309 | R | DspDCMMcrBP (100% identity) | Ddi21439McrBP | |
| 1310 | R | DspDCMMcrCP (100% identity) | Ddi21439McrCP | |
| 1311 | 345 aa hypothetical protein | |||