Synechococcus species PCC 7502 |
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Putative Synechococcus species PCC 7502 RM systems
Ref: Gugger,M. et al. unpublished
REBASE ref # 15326
| Sequence length: | GenBank #: | |
| Chromosome: | 3,510,253 bp | CP003594 |
| plasmid pSYN7502.01: | 63,272 bp | CP003595 |
REBASE acronym: Ssp7502
Org_num: 9770
All begin Syn7502_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1388 | 911 aa hypothetical protein | |||
| 1389 | R | Ssp7502ORFABP (60% identity) | Ssp7502ORF1394P | |
| 1391 | 124 aa hypothetical protein | |||
| 1392 | nucleotidyltransferase | |||
| 1393 | S | S.Ssp7502ORFAP (100% identity) | S.Ssp7502ORF1394P | |
| 1394 | M | M.Ssp7502ORFAAP (73% identity) | M.Ssp7502ORF1394P | |
| 1397 | 171 aa hypothetical protein | |||
| 1388 | 911 aa hypothetical protein | |||
| ??? | R | Ssp7502ORF1394P (60% identity) | Ssp7502ORFABP | |
| 1390 | pseudogene | |||
| ??? | R | Ssp7502ORF1394P (39% identity) | Ssp7502ORFAAP | |
| 1391 | 124 aa hypothetical protein | |||
| 1392 | nucleotidyltransferase | |||
| 1393 | S | S.Ssp7502ORF1394P (100% identity) | S.Ssp7502ORFAP | |
| ??? | M | adenine-specific DNA-methyltransferase | M.Ssp7502ORFABP | |
| 1395 | transposase | |||
| 1396 | pseudogene | |||
| ??? | M | M.Ssp7502ORF1394P (73% identity) | M.Ssp7502ORFAAP | |
| 1397 | 171 aa hypothetical protein | |||
| plasmid pSYN7502.01 | ||||
| 3615 | pseudogene | |||
| 3616 | M | M.Dsp315AORF5P (90% identity) | M.Ssp7502ORF3616P | |
| 3617 | 101 aa hypothetical protein | |||
| 3618 | 76 aa hypothetical protein | |||
| 3619 | S | S.Dli5ac10ORF49790P (34% identity) | S1.Ssp7502ORF3616P | |
| 3620 | pseudogene | |||
| 3621 | S | S.Mae87ORF31360P (27% identity) | S2.Ssp7502ORF3616P | |
| 3622 | nucleotidyltransferase | |||
| 3623 | 115 aa hypothetical protein | |||
| 3624 | 79 aa hypothetical protein | |||
| 3625 | nucleic acid-binding protein, contains | |||
| 3626 | 59 aa hypothetical protein | |||
| 3627 | 69 aa hypothetical protein | |||
| 3628 | nucleic-acid-binding protein, contains | |||
| 3629 | R | Dsp315AORF5P (81% identity) | Ssp7502ORF3616P | |
| 3630 | metal-dependent hydrolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 143 | nucleic acid-binding protein, contains | |||
| 144 | S | S.Mae98ORF3931P (88% identity) | S.Ssp7502ORF145P | |
| 145 | M | M.Mae98ORF3931P (93% identity) | M.Ssp7502ORF145P | |
| 146 | lipoate-protein ligase A | |||
| 375 | phosphohydrolase | |||
| 376 | R | Nsp870ORF415P (71% identity) | RGCGCY | Ssp7502ORF377P |
| 377 | M | M.Nsp870ORF415P (66% identity) | RGCGCY | M.Ssp7502ORF377P |
| 378 | carotene isomerase | |||
| 645 | Protein of unknown function (DUF2281) | |||
| 646 | RM | MaeFD4ORF12320P (80% identity) | Ssp7502ORF646P | |
| 647 | riboflavin kinase/FMN adenylyltransferase | |||
| 978 | transcription-repair coupling factor Mfd | |||
| 979 | M | M.Wna131ORF33080P (58% identity) | M.Ssp7502ORF979P | |
| 980 | 79 aa hypothetical protein | |||
| 1021 | peptide chain release factor 1 | |||
| 1022 | M | M.CraKLL07ORF1295P (78% identity) | ATGCAT | M.Ssp7502ORF1022P |
| 1023 | R | Pag758ORF1349P (78% identity) | ATGCAT | Ssp7502ORF1022P |
| 1024 | cell division protein | |||
| 1120 | 67 aa hypothetical protein | |||
| 1121 | M | M.GliD10ORF1040P (68% identity) | CGCG | M.Ssp7502ORF1121P |
| 1122 | 234 aa hypothetical protein | |||
| 1159 | 60 aa hypothetical protein | |||
| 1160 | M | M.Ssp7502ORF1527P (57% identity) | YGGCCR | M.Ssp7502ORF1160P |
| 1161 | 137 aa hypothetical protein | |||
| 1162 | transposase family protein | |||
| 1163 | 81 aa hypothetical protein | |||
| 1164 | 64 aa hypothetical protein | |||
| 1165 | 153 aa hypothetical protein | |||
| 1166 | RM | Ssp6714ORF40360P (37% identity) | Ssp7502ORF1160P | |
| 1167 | pseudogene | |||
| 1366 | 159 aa hypothetical protein | |||
| 1367 | RM | Pmu1806ORFBP (33% identity) | Ssp7502ORF1367P | |
| 1368 | pseudogene | |||
| 1526 | 920 aa hypothetical protein | |||
| 1527 | M | M.Ssp7502ORF1160P (57% identity) | YGGCCR | M.Ssp7502ORF1527P |
| 1528 | 121 aa hypothetical protein | |||
| 1785 | ferredoxin, (2Fe-2S) | |||
| 1786 | M | M.Asp9108ORF4400P (76% identity) | TACGTA | M.Ssp7502ORF1786P |
| 1787 | R | Asp9108ORF4400P (74% identity) | TACGTA | Ssp7502ORF1786P |
| 1788 | C | C.LfuKN01ORF6475P (81% identity) | C.Ssp7502ORF1786P | |
| 1789 | helix-turn-helix domain-containing protein | |||
| 1814 | 30S ribosomal protein S13 | |||
| 1815 | M | M.PspAAP82ORFEP (49% identity) | TCTAGA | M.Ssp7502ORF1815P |
| 1816 | DNA polymerase sigma | |||
| 1923 | pterin-4a-carbinolamine dehydratase | |||
| 1924 | M | M.Pag66ORF691P (62% identity) | CGATCG | M.Ssp7502ORF1924P |
| 1925 | 150 aa hypothetical protein | |||
| 2117 | precorrin-3B synthase | |||
| 2118 | M | M.Hri593ORF20915P (72% identity) | GGCC | M.Ssp7502ORF2118P |
| 2119 | R | Hri593ORF20915P (64% identity) | GGCC | Ssp7502ORF2118P |
| 2120 | cobalamin biosynthesis protein CobW | |||
| 2127 | 259 aa hypothetical protein | |||
| 2128 | M | M.Pmu1806ORFLP (81% identity) | CCWGG | M.Ssp7502ORF2128P |
| 2129 | 136 aa hypothetical protein | |||
| 2330 | hydrolase, CocE/NonD family | |||
| 2331 | RM | Psp1811ORFJP (63% identity) | Ssp7502ORF2331P | |
| 2332 | 80 aa hypothetical protein | |||
| 2503 | ABC-type antimicrobial peptide transport system, | |||
| 2504 | M | M.PprC007ORFJP (72% identity) | M.Ssp7502ORF2504P | |
| 2505 | molybdenum ABC transporter, periplasmic | |||
| 2618 | Xaa-Pro aminopeptidase | |||
| 2619 | M | M.GliD10ORF1899P (81% identity) | M.Ssp7502ORF2619P | |
| 2620 | 220 aa hypothetical protein | |||
| 2814 | 110 aa hypothetical protein | |||
| 2815 | M | M.MspGI1ORFLP (47% identity) | M.Ssp7502ORF2815P | |
| 2816 | HNH endonuclease | |||
| 3528 | Protein of unknown function (DUF2281) | |||
| 3529 | RM | Dco806ORF46430AP (53% identity) | Ssp7502ORF3529P | |
| 3530 | 73 aa hypothetical protein | |||
| 3558 | 107 aa hypothetical protein | |||
| 3559 | M | M.PagC7805ORF1094P (49% identity) | GATC | M.Ssp7502ORF3559P |
| 3560 | R | PspFMAR1ORFEP (46% identity) | GATC | Ssp7502ORF3559P |
| 3561 | Co/Zn/Cd efflux system component | |||