Bifidobacterium bifidum LMG 13195 |
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Putative Bifidobacterium bifidum LMG 13195 RM systems
Ref: Gueimonde,M. et al. J. Bacteriol. 194 (24), 6997 (2012)
REBASE ref # 15294
| Sequence length: | GenBank #: | |
| Chromosome: | 2,283,145 bp | AMPL00000000 (NZ_AMPL00000000) |
| Chromosome: | 2,261,666 bp | AP018131 |
REBASE acronym: Bbi13195
Org_num: 9735
All begin B216_, BBJK_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | S | S1.BloZJ1ORFCP (44% identity) | S.Bbi13195ORF5470P | |
| 5470 | M | M.BbrJR01ORF2850P (99% identity) | M.Bbi13195ORF5470P | |
| 5475 | R | Bbi4319ORF1329P (97% identity) | Bbi13195ORF5470P | |
| 9838 | S | S2.Bfi002ORF9040P (54% identity) | S.Bbi13195ORF9838P | |
| 9888 | S | S2.PmeBin423ORFBP (47% identity) | S.Bbi13195ORF9888P | |
| ??? | S | S2.Bbi29521ORF1355P (60% identity) | S.Bbi13195ORFBP | |
| 9728 | phage integrase | |||
| ??? | S | S2.Bps1ORF3835P (45% identity) | S.Bbi13195ORFCP | |
| 9176 | 280 aa hypothetical protein | |||
| 9181 | M | M.Bbi310ORF4825P (100% identity) | M.Bbi13195ORF9181P | |
| 9186 | S | S1.BloB5ORF2935P (50% identity) | S.Bbi13195ORF9181P | |
| 9191 | transcriptional regulator | |||
| 9196 | R | PmeBin303ORFGP (95% identity) | Bbi13195ORF9181P | |
| 9201 | argininosuccinate lyase | |||
| Chromosome | ||||
| 102 | 169 aa hypothetical protein | |||
| 103 | R | Bbi10347ORF1304P (83% identity) | Bbi7004ORF108P | |
| 106 | 515 aa hypothetical protein | |||
| 107 | S | S.Bbi3223ORF5590P (57% identity) | S1.Bbi7004ORF108P | |
| ??? | S | Uncharacterized protein | S2.Bbi7004ORF108P | |
| ??? | M | M.Bbi29521ORF1139P (92% identity) | M.Bbi7004ORF108P | |
| 111 | 163 aa hypothetical protein | |||
| 114 | S | S1.Bbi7004ORF108P (33% identity) | S3.Bbi7004ORF108P | |
| 116 | phage integrase | |||
| ??? | S | S1.Bfi002ORF9040P (71% identity) | S4.Bbi7004ORF108P | |
| 119 | argininosuccinate synthase | |||
| 1691 | phage protein | |||
| 1692 | M | M.Blo114494ORF1040P (100% identity) | M.Bbi7004ORF1692P | |
| 1693 | 38 aa hypothetical protein | |||
| 1694 | S | S.BlosBB02ORF1030P (98% identity) | S.Bbi7004ORF1692P | |
| 1695 | phage AbiD protein | |||
| 1697 | R | Blo114494ORF1040P (99% identity) | Bbi7004ORF1692P | |
| 1698 | 129 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9451 | 215 aa hypothetical protein | |||
| 9456 | R | R2.BloP0001ORFBP (92% identity) | GGCGCC | Bbi13195ORF9456P |
| 9613 | HNH endonuclease | |||
| 9618 | M | M.Bbi3223ORF7950P (63% identity) | M.Bbi13195ORF9618P | |
| 4120 | Integrase/recombinase | |||
| 4125 | M | M.PmeBin303ORFDP (100% identity) | CTCGAG | M.Bbi13195ORF4125P |
| 4130 | R | PmeBin303ORFDP (100% identity) | CTCGAG | Bbi13195ORF4125P |
| 4135 | 85 aa hypothetical protein | |||
| 8911 | GTP-binding protein | |||
| 8916 | R | BbiS6ORF8015P (99% identity) | Bbi13195ORF8916P | |
| 8921 | methyltransferase domain containing protein | |||
| 1113 | M | M.BspCAORFBP (96% identity) | CCWGG | M.Bbi13195ORF1113P |
| 1118 | 474 aa hypothetical protein | |||
| 7336 | FRG domain-containing protein | |||
| ??? | M | M.BloP0001ORFBP (83% identity) | GGCGCC | M.Bbi13195ORFAP |
| ??? | R | BloB5ORF10755P (100% identity) | GGCGCC | Bbi13195ORFAP |
| 7351 | 44 aa hypothetical protein | |||
| Chromosome | ||||
| 1033 | oligoribonuclease | |||
| 1035 | M | M.Mka1458ORF4355P (59% identity) | M.Bbi7004ORF1035P | |
| 1038 | helicase domain-containing protein | |||
| 2317 | 217 aa hypothetical protein | |||
| ??? | R | BbiS6ORF8015P (100% identity) | Bbi7004ORF2318P | |
| 2321 | GTP-binding protein HflX | |||
| 2571 | phage integrase | |||
| 2572 | M | M.PmeBin303ORFDP (100% identity) | M.Bbi7004ORF2572P | |
| ??? | R | PmeBin303ORFDP (100% identity) | Bbi7004ORF2572P | |
| 2573 | 290 aa hypothetical protein | |||
| 2741 | 90 aa hypothetical protein | |||
| ??? | M | M.Bbi3223ORF7950P (99% identity) | M.Bbi7004ORFAP | |
| 2744 | 84 aa hypothetical protein | |||
| 2876 | 93 aa hypothetical protein | |||
| 2877 | RM | Bbi8628BORF2159P (95% identity) | Bbi7004ORF2877AP | |
| ??? | RM | Bbi2010ORF860P (100% identity) | Bbi7004ORF2877BP | |
| 2882 | 821 aa hypothetical protein | |||
| 2946 | 390 aa hypothetical protein | |||
| 2947 | R | Bbi2010ORF968P (100% identity) | Bbi7004ORF2948P | |
| 2948 | M | M.Bbi2010ORF968P (96% identity) | M1.Bbi7004ORF2948P | |
| 2949 | M | M.Bbi2010ORF968P (86% identity) | M2.Bbi7004ORF2948P | |
| 2951 | 60 aa hypothetical protein | |||