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Putative Rhodovulum species PH10 RM systems
Ref: Khatri,I. et al. J. Bacteriol. 194 (22), 6363 (2012)
REBASE ref # 15147
Contig set: 4,831,432 bp
GenBank #: AKZI00000000 (NZ_AKZI00000000)
REBASE acronym: Rsp10
Org_num: 9607
All begin A33M_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
4089 | 129 aa hypothetical protein | |||
4090 | M | M.Apr102029ORF20300P (84% identity) | M.Rsp10ORF4090P | |
4091 | S | S.LbaAMV1ORF1123P (40% identity) | S.Rsp10ORF4090P | |
4092 | 215 aa hypothetical protein | |||
4093 | Appr-1-p processing domain protein | |||
4094 | R | Apr102029ORF20300P (75% identity) | Rsp10ORF4090P | |
4095 | 820 aa hypothetical protein | |||
2968 | Integrase | |||
2969 | M | M.MtrOB3bORF7115P (81% identity) | M.Rsp10ORF2969P | |
2970 | S | S.BspS2201ORF24450P (35% identity) | S.Rsp10ORF2969P | |
2971 | 99 aa hypothetical protein | |||
2972 | 66 aa hypothetical protein | |||
2973 | R | Rba191ORF5624P (78% identity) | Rsp10ORF2969P | |
2974 | 229 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
893 | RM | PaePA7I (57% identity) | Rsp10ORF893P | |
894 | 482 aa hypothetical protein | |||
454 | 92 aa hypothetical protein | |||
455 | M | M.AspNLS2ORF2598P (65% identity) | RGATCY | M.Rsp10ORF455P |
456 | 116 aa hypothetical protein | |||
1690 | 129 aa hypothetical protein | |||
1691 | M | M.Pst52518ORF16225P (67% identity) | M.Rsp10ORF1691P | |
1692 | Lytic enzyme | |||
1325 | YpfJ protein, zinc metalloprotease superfamily | |||
1326 | M | M.PtaBB4ORF24335P (69% identity) | GANTC | M.Rsp10ORF1326P |
1327 | A/G-specific adenine glycosylase | |||
2227 | 51 aa hypothetical protein | |||
2228 | V | V.RpaTORF352P (61% identity) | V.Rsp10ORF2229P | |
2229 | M | M.MspC49ORF17000P (63% identity) | M.Rsp10ORF2229P | |
2230 | quinone oxidoreductase |