Helicobacter pylori NAD1 |
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Putative Helicobacter pylori NAD1 RM systems
Ref: Kumar,N. et al. J. Bacteriol. 194 (21), 5963-5964 (2012)
REBASE ref # 15038
GenBank #: AJGJ00000000
REBASE acronym: HpyNAD1
Org_num: 9493
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | S | S.HpyGE3ORF6990P (46% identity) | S.HpyNAD1ORFXP | |
| ??? | S | S.HpySP508VII (90% identity) | S.HpyNAD1ORFVP | |
| ??? | R | HpyMA16XVP (94% identity) | HpyNAD1ORFPP | |
| ??? | S | HP790-like protein | S.HpyNAD1ORFPP | |
| ??? | M | M.HpyGE13ORF3895P (75% identity) | M.HpyNAD1ORFPP | |
| ??? | M | M.HpyGE3ORF7290P (75% identity) | M.HpyNAD1ORFWP | |
| ??? | R | HpyAL2ORF6985P (95% identity) | HpyNAD1ORFWP | |
| ??? | S | S.HpyGU1CORF5200P (96% identity) | S.HpyNAD1ORFHP | |
| ??? | R | type I restriction enzyme, R subunit | HpyNAD1ORFFP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | 97 aa hypothetical protein HPHPH43_0540 | |||
| ??? | M | M.HpyPO13III (97% identity) | ATTAAT | M.HpyNAD1ORFSP |
| ??? | M | M.HpySP107ORF6540P (40% identity) | GATATC | M.HpyNAD1ORFZP |
| ??? | site-specific DNA-methyltransferase | |||
| ??? | M | M.HpyC80XIII (99% identity) | GANTC | M.HpyNAD1ORFUP |
| ??? | R | HpySP601VIP (97% identity) | GANTC | HpyNAD1ORFUP |
| ??? | RM | HpyMM03ORF6570P (82% identity) | HpyNAD1ORFG1P | |
| ??? | M | M.HpySWT14II (97% identity) | TCGA | M.HpyNAD1ORFLP |
| ??? | endonuclease MjaVIP | |||
| ??? | hypothetical protein | |||
| ??? | R | HpyIR2IVP (78% identity) | CCGG | HpyNAD1ORFMP |
| ??? | M | M.Hpy45kORF5905P (99% identity) | CCGG | M.HpyNAD1ORFMP |
| ??? | M | M.HpySP301ORF2040P (98% identity) | ACGT | M.HpyNAD1ORFB1P |
| ??? | type II restriction endonuclease | |||
| ??? | type II DNA modification enzyme | |||
| ??? | R | HpySP319IIP (97% identity) | ACNGT | HpyNAD1ORFC1P |
| ??? | M | M.HpyT017II (98% identity) | ACNGT | M.HpyNAD1ORFC1P |
| ??? | M | M.HpyZ008XII (93% identity) | GCGC | M.HpyNAD1ORFIP |
| ??? | M | M.HpyAR3VII (97% identity) | GATC | M.HpyNAD1ORFTP |
| ??? | M | M.Hpyfe123ORF5560P (99% identity) | GCNGC | M.HpyNAD1ORFGP |
| ??? | M | M.HpySW14III (98% identity) | TCNNGA | M.HpyNAD1ORFKP |
| ??? | R | HpyBG1XIP (82% identity) | TCNNGA | HpyNAD1ORFKP |
| ??? | R | HpyCOL307XP (91% identity) | GTNNAC | HpyNAD1ORFOP |
| ??? | M | M.Hpyfe89ORF2705P (92% identity) | GTNNAC | M.HpyNAD1ORFOP |
| ??? | hypothetical protein | |||
| ??? | RM | HpyAL5XVII (77% identity) | HpyNAD1ORFEP | |
| ??? | M | M.HpyLI03ORF2320P (97% identity) | GTAC | M.HpyNAD1ORFJP |
| ??? | R | HpyKH27ORFUP (99% identity) | GTAC | HpyNAD1ORFJP |
| ??? | M | M.HpyCOL112I (97% identity) | CATG | M.HpyNAD1ORFH1P |
| ??? | R | HpyPO11IP (95% identity) | CATG | HpyNAD1ORFH1P |
| ??? | R | Hpyfe21ORF7315P (99% identity) | GAAGA | HpyNAD1ORFF1P |
| ??? | M | M1.Hpyfe21ORF7315P (99% identity) | GAAGA | M1.HpyNAD1ORFF1P |
| ??? | M | M2.HpyU204VIII (95% identity) | GAAGA | M2.HpyNAD1ORFF1P |
| ??? | RM | hypothetical protein | HpyNAD1ORFRP | |
| ??? | M | DNA -methyltransferase | CTNAG | M.HpyNAD1ORFQP |
| ??? | R | HpyKH7ORFIP (84% identity) | CCATC | HpyNAD1ORFCP |
| ??? | M | M2.HpyKH19ORFRP (99% identity) | CCTC | M2.HpyNAD1ORFAP |
| ??? | M | M1.HpySW10X (97% identity) | CCTC | M1.HpyNAD1ORFAP |
| ??? | R | HpyLI23IIP (86% identity) | TGCA | HpyNAD1ORFE1P |
| ??? | M | M.HpyCRI7ORF6720P (86% identity) | TGCA | M.HpyNAD1ORFE1P |
| ??? | RM | HpyK112ORF6940P (98% identity) | HpyNAD1ORFBP | |
| ??? | S | S.Hpy321ORFVAP (89% identity) | S.HpyNAD1ORFBP | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | site-specific DNA-methyltransferase | |||
| ??? | R | HpyFD423ORFLP (92% identity) | HpyNAD1ORFA1P | |
| ??? | M | M.HpyS298ORF4160P (96% identity) | M.HpyNAD1ORFDP | |
| ??? | R | HpyOki112ORF7725P (92% identity) | HpyNAD1ORFDP | |
| ??? | type IIS restriction-modification protein | |||
| ??? | M | M.HpyI029ORF6585P (96% identity) | M.HpyNAD1ORFYP | |
| ??? | R | HpyT006XIP (94% identity) | HpyNAD1ORFYP | |