Helicobacter pylori GC26 |
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Putative Helicobacter pylori GC26 RM systems
Ref: Gunaletchumy,S.P. et al. J. Bacteriol. 194 (20), 5695-5696 (2012)
REBASE ref # 15007
GenBank #: AKHV00000000
REBASE acronym: HpyGC26
Org_num: 9455
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | S | type I restriction-modification system specificity subunit S | S.HpyGC26ORFAP | |
| ??? | S | type I restriction enzyme, S subunit | S.HpyGC26ORFCP | |
| ??? | S | type I site-specific deoxyribonuclease | S.HpyGC26ORFBP | |
| ??? | M | M.HpyML2ORFUP (90% identity) | M.HpyGC26ORFHP | |
| ??? | R | HpyUM023ORF5765P (97% identity) | HpyGC26ORFMP | |
| ??? | S | S.Hpy13AORF7800P (90% identity) | S.HpyGC26ORFE1P | |
| ??? | M | M.Hpyfe48ORF7700P (92% identity) | M.HpyGC26ORFE1P | |
| ??? | R | Hpyfe74ORF7605P (97% identity) | HpyGC26ORFE1P | |
| ??? | S | S.HpyJ028ORF2470P (91% identity) | S.HpyGC26ORFL1P | |
| ??? | M | M.HpyAR8ORF2245P (97% identity) | M.HpyGC26ORFL1P | |
| ??? | R | HpyK035ORF2270P (74% identity) | HpyGC26ORFL1P | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | adenine specific DNA methyltransferase 2 | |||
| ??? | M | M.HpyUM023ORF560P (100% identity) | GANTC | M.HpyGC26ORFGP |
| ??? | R | Hpyfe123ORF7070P (98% identity) | HpyGC26ORFGP | |
| ??? | RM | adenine specific DNA methyltransferase 2 | HpyGC26ORFFP | |
| ??? | 159 aa hypothetical protein HPP12_1318 | |||
| ??? | RM | Hpyfe123ORF7075P (66% identity) | HpyGC26ORFUP | |
| ??? | RM | adenine specific DNA methyltransferase | HpyGC26ORFDP | |
| ??? | M | M.HpyJ029IX (98% identity) | ATTAAT | M.HpyGC26ORFEP |
| ??? | DD-heptosyltransferase | |||
| ??? | M | M2.Hpyfe66ORF6860P (35% identity) | CCTC | M1.HpyGC26ORFNP |
| ??? | M | M1.Hpyfe76ORF6770P (78% identity) | CCTC | M2.HpyGC26ORFNP |
| ??? | M | M.Hpy898ORF1620P (99% identity) | CCGG | M.HpyGC26ORFXP |
| ??? | R | HpyUM085ORF1000P (92% identity) | CCGG | HpyGC26ORFXP |
| ??? | type II DNA modification enzyme | |||
| ??? | R | Hpyfe88ORF4775P (100% identity) | ACNGT | HpyGC26ORFJP |
| ??? | M | M.HpyTW17V (98% identity) | ACNGT | M.HpyGC26ORFJP |
| ??? | M | M.HpyTW24ORF2345P (87% identity) | ACGT | M.HpyGC26ORFIP |
| ??? | type II restriction endonuclease | |||
| ??? | M | M.HpyK016XIV (97% identity) | GCGC | M.HpyGC26ORFOP |
| ??? | M | M.HpyTW09ORF3375P (99% identity) | GGNNCC | M.HpyGC26ORFLP |
| ??? | R | HpyTN2ORF7450P (100% identity) | GGNNCC | HpyGC26ORFLP |
| ??? | M | M.Hpyfe1ORF5730P (100% identity) | CTNAG | M.HpyGC26ORFVP |
| ??? | R | Hpy4125ORFRP (97% identity) | CTNAG | HpyGC26ORFVP |
| ??? | R | HpyCHN1XP (98% identity) | TCNNGA | HpyGC26ORFWP |
| ??? | M | M.Hpyfe88ORF2055P (99% identity) | TCNNGA | M.HpyGC26ORFWP |
| ??? | R | HpyK25ORF705P (96% identity) | GATC | HpyGC26ORFPP |
| ??? | M | M.HpySH011VIII (98% identity) | GATC | M.HpyGC26ORFPP |
| ??? | R | HpySG13XIP (95% identity) | GTNNAC | HpyGC26ORFYP |
| ??? | M | M.HpyP82ORFBP (98% identity) | GTNNAC | M.HpyGC26ORFYP |
| ??? | M | M.Hpybs1ORFEP (99% identity) | GTAC | M.HpyGC26ORFB1P |
| ??? | R | HpyF226ORFRP (98% identity) | GTAC | HpyGC26ORFB1P |
| ??? | M | M.HpyJ029I (98% identity) | CATG | M.HpyGC26ORFC1P |
| ??? | R | HpyOK302ORFBP (84% identity) | CATG | HpyGC26ORFC1P |
| ??? | 606 aa hypothetical protein HP9810_5g45 | |||
| ??? | RM | HpyPF57ORF3445P (57% identity) | HpyGC26ORFA1P | |
| ??? | RM | Hpyfe75ORF3890P (36% identity) | HpyGC26ORFZP | |
| ??? | Type IIG restriction-modification enzyme | |||
| ??? | S | S.HpyK047ORF6800P (88% identity) | S.HpyGC26ORFJ1P | |
| ??? | M | M.Hpyfe114ORF270P (100% identity) | GGNCC | M.HpyGC26ORFJ1P |
| ??? | R | Hpyfe110ORF290P (100% identity) | GGNCC | HpyGC26ORFJ1P |
| ??? | restriction enzyme BcgI alpha chain-like protein | |||
| ??? | type II site-specific deoxyribonuclease | |||
| ??? | RM | restriction enzyme BcgI alpha chain-like protein | HpyGC26ORFK1P | |
| ??? | M | type II methylase protein | TGCA | M.HpyGC26ORFD1P |
| ??? | R | HpyM6CORFCP (99% identity) | TGCA | HpyGC26ORFD1P |
| ??? | M | M1.HpyTW09IV (98% identity) | GATGG | M1.HpyGC26ORFI1P |
| ??? | M | M2.HpyV004III (93% identity) | CCATC | M2.HpyGC26ORFI1P |
| ??? | R | HpyTW20VIP (98% identity) | CCATC | HpyGC26ORFI1P |
| ??? | RM | HpyMA22ORF7100P (80% identity) | HpyGC26ORFG1P | |
| ??? | 970 aa hypothetical protein HP9810_885g19 | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.Hpyfe93ORF40P (68% identity) | M.HpyGC26ORFF1P | |
| ??? | M | M.Hpyfe114ORF650P (87% identity) | M.HpyGC26ORFKP | |
| ??? | R | HpyH1ORFDP (85% identity) | HpyGC26ORFKP | |
| ??? | type IIS restriction enzyme R protein | |||
| ??? | M | M.HpyH024ORF380P (92% identity) | M.HpyGC26ORFTP | |
| ??? | R | HpyJ028XIIIP (94% identity) | HpyGC26ORFTP | |
| ??? | type II restriction-modification enzyme | |||
| ??? | R | HpyOK68ORFFP (97% identity) | HpyGC26ORFH1P | |
| ??? | M | M.Hpyfe70ORF40P (28% identity) | M.HpyGC26ORFH1P | |