Helicobacter pylori FD506 |
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Putative Helicobacter pylori FD506 RM systems
Ref: Gunaletchumy,S.P. et al. J. Bacteriol. 194 (20), 5695-5696 (2012)
REBASE ref # 15007
GenBank #: AKHO00000000
REBASE acronym: HpyFD506
Org_num: 9428
All begin N404_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | S | type I site-specific deoxyribonuclease | S.HpyFD506ORFCP | |
| ??? | S | S.Hpyfe49ORF275P (49% identity) | S.HpyFD506ORFE1P | |
| ??? | S | type I restriction-modification enzyme, S subunit | S.HpyFD506ORFJP | |
| ??? | M | M.HpyT028ORF2215P (97% identity) | M.HpyFD506ORFJP | |
| ??? | R | HpySG07ORF4445BP (93% identity) | HpyFD506ORFJP | |
| ??? | S | S.HpyTW10ORF4230P (35% identity) | S.HpyFD506ORFBP | |
| ??? | S | type I restriction enzyme, S subunit | S.HpyFD506ORFOP | |
| ??? | R | HpyJ009ORF2695P (97% identity) | HpyFD506ORFOP | |
| ??? | M | M.HpyC004ORF4065P (81% identity) | M.HpyFD506ORFKP | |
| ??? | S | type I restriction enzyme | S.HpyFD506ORFAP | |
| ??? | S | Type I restriction/modification specificity protein | S.HpyFD506ORFFP | |
| ??? | R | HpyMA08VP (96% identity) | HpyFD506ORFC1P | |
| ??? | M | M.HpySH007ORF7295P (96% identity) | M.HpyFD506ORFC1P | |
| ??? | S | S.HpyAR8VII (98% identity) | S.HpyFD506ORFC1P | |
| 3840 | 30 aa hypothetical protein | |||
| 3845 | S | S.HpyAR8VII (98% identity) | S.HpyFD506ORFC1P | |
| 3850 | M | M.HpySH007ORF7295P (96% identity) | M.HpyFD506ORFC1P | |
| ??? | R | HpyMA08VP (96% identity) | HpyFD506ORFC1P | |
| 3860 | metal-dependent hydrolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | RM | adenine specific DNA methyltransferase 2 | HpyFD506ORFGP | |
| ??? | adenine specific DNA methyltransferase | |||
| ??? | adenine specific DNA methyltransferase 2 | |||
| ??? | M | M.Hpyfe29ORF6865P (100% identity) | GANTC | M.HpyFD506ORFHP |
| ??? | R | HpyOK314ORFPP (98% identity) | GANTC | HpyFD506ORFHP |
| ??? | 106 aa hypothetical protein HPCPY1124_0079 | |||
| ??? | RM | Hpyfe125ORF3670P (41% identity) | HpyFD506ORFH1P | |
| ??? | RM | Type IIG restriction-modification enzyme | HpyFD506ORFDP | |
| ??? | M | M.HpyF211ORF480P (98% identity) | ATTAAT | M.HpyFD506ORFEP |
| ??? | DD-heptosyltransferase | |||
| ??? | M | M.HpyML3ORFHP (100% identity) | TGCA | M.HpyFD506ORFWP |
| ??? | R | HpyMA20VIIP (99% identity) | TGCA | HpyFD506ORFWP |
| ??? | R | DNA methyltransferase | GAAGA | HpyFD506ORFQP |
| ??? | M | M.HpyF20JORF964P (98% identity) | CCGG | M.HpyFD506ORFRP |
| ??? | R | Hpyfe32ORF5915P (92% identity) | CCGG | HpyFD506ORFRP |
| ??? | type II restriction endonuclease | |||
| ??? | RM | 106 aa hypothetical protein HPCPY1124_0079 | HpyFD506ORFIP | |
| ??? | M | M.HpyUM077ORF7105P (99% identity) | GCGC | M.HpyFD506ORFNP |
| ??? | RM | HpySG15ORF280P (66% identity) | HpyFD506ORFMP | |
| ??? | R | HpyDU7AORFJP (99% identity) | GTAC | HpyFD506ORFF1P |
| ??? | M | M.Hpy39ORFEP (99% identity) | GTAC | M.HpyFD506ORFF1P |
| ??? | R | HpyK009ORF2310P (100% identity) | ACGT | HpyFD506ORFUP |
| ??? | M | M.Hpy3ORF5720P (94% identity) | ACGT | M.HpyFD506ORFUP |
| ??? | type II restriction endonuclease | |||
| ??? | cytosine-specific methyltransferase | |||
| ??? | R | HpyUM032IIP (99% identity) | ACNGT | HpyFD506ORFVP |
| ??? | M | M.HpyV002II (100% identity) | ACNGT | M.HpyFD506ORFVP |
| ??? | M | M.Hpy63ORF905P (93% identity) | GTNNAC | M.HpyFD506ORFTP |
| ??? | R | HpyTW07XIIIP (98% identity) | GTNNAC | HpyFD506ORFTP |
| ??? | RM | 933 aa hypothetical protein | HpyFD506ORFSP | |
| ??? | R | HpyUM077ORF4160P (96% identity) | GATC | HpyFD506ORFD1P |
| ??? | M | M.HpyK033V (97% identity) | GATC | M.HpyFD506ORFD1P |
| ??? | M | M.HpyJA107I (85% identity) | CATG | M.HpyFD506ORFZP |
| ??? | R | Hpy169ORF230P (94% identity) | CCTC | HpyFD506ORFXP |
| ??? | M | M2.HpyUM038ORF1610P (99% identity) | CCTC | M2.HpyFD506ORFXP |
| ??? | M | M1.HpyK028V (77% identity) | CCTC | M1.HpyFD506ORFXP |
| ??? | R | R2.HpySG38ORF6280P (99% identity) | R2.HpyFD506ORFL1P | |
| ??? | R | R1.HpyMA12ORF5810P (99% identity) | R1.HpyFD506ORFL1P | |
| ??? | M | M1.HpyTW01ORF900P (98% identity) | M.HpyFD506ORFL1P | |
| ??? | R | M.HpyFD506ORFZP (28% identity) | CATG | HpyFD506ORFA1P |
| ??? | RM | HpyP87ORFOP (66% identity) | HpyFD506ORFJ1P | |
| ??? | res-4 gene product | |||
| ??? | R | Hpyfe8ORF4870P (99% identity) | TCNNGA | HpyFD506ORFI1P |
| ??? | M | M.Hpyfe12ORF2065P (100% identity) | TCNNGA | M.HpyFD506ORFI1P |
| ??? | RM | HpyK005ORF7145P (98% identity) | HpyFD506ORFM1P | |
| ??? | S | S1.Hpy3ORF14610P (95% identity) | S.HpyFD506ORFM1P | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | HpyOK304ORFEP (94% identity) | HpyFD506ORFB1P | |
| ??? | M | M.Hpyfe120ORF630P (96% identity) | M.HpyFD506ORFB1P | |
| ??? | M | M.HpyTW18ORF7375P (69% identity) | M.HpyFD506ORFLP | |
| ??? | type II restriction-modification enzyme | |||
| ??? | R | HpyU011ORF7420P (97% identity) | HpyFD506ORFK1P | |
| ??? | M | M.Hpyfe120ORF40P (29% identity) | M.HpyFD506ORFK1P | |