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Putative Dinoroseobacter shibae DFL 12 RM systems
Ref: Copeland,A. et al. unpublished
REBASE ref # 10360
Complete sequence: 3,789,584 bp
GenBank #: CP000830 (NC_009952)
REBASE acronym: Dsh12
Org_num: 4921
All begin Dshi_
Type II | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
1916 | 243 aa hypothetical protein | |||
1917 | M | M1.Dsh36ORF9925P (92% identity) | GACGGC | M1.Dsh12II |
1918 | M | M2.Dsh36ORF9925P (95% identity) | GACGGC | M2.Dsh12II |
1919 | 576 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
2100 | integrase | |||
2101 | R | Dsh36ORF10880P (100% identity) | Dsh12ORF2102P | |
2102 | M | M.Dsh36ORF10880BP (97% identity) | M.Dsh12ORF2102AP | |
2103 | transposase | |||
2104 | integrase | |||
2105 | M | M.Dsh36ORF10880AP (100% identity) | M.Dsh12ORF2102BP | |
2106 | C | C.Dsh36ORF10880P (100% identity) | C.Dsh12ORF2102P | |
2107 | 232 aa hypothetical protein | |||
Orphan M | ||||
ORF | Gene | Most similar | Specificity | Name |
23 | ribonuclease HII | |||
24 | M | M.Dsh36ORF120P (100% identity) | GANTC | M.Dsh12I |
25 | transcriptional activator anti-ECFsigma factor |