Gordonia species KTR9 |
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Putative Gordonia species KTR9 RM systems
Ref: Chen,H.-P. et al. Appl. Environ. Microbiol. (2012) In press
REBASE ref # 14961
| Sequence length: | GenBank #: | |
| Chromosome: | 5,441,391 bp | CP002907 |
| plasmid pGKT1: | 89,480 bp | CP002908 |
| plasmid pGKT3: | 172,385 bp | CP002909 |
REBASE acronym: GspKTR9
Org_num: 6116
All begin KTR9_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 740 | 84 aa hypothetical protein | |||
| 741 | M | M.Gte3612ORF4075P (99% identity) | GGATC | M.GspKTR9ORF741P |
| 742 | Diadenosine tetraphosphate (Ap4A) hydrolase-like | |||
| 1347 | 115 aa hypothetical protein | |||
| 1348 | M | M.MchH072ORF4145P (66% identity) | M.GspKTR9ORF1348P | |
| 1349 | 237 aa hypothetical protein | |||
| 2457 | helicase domain-containing protein | |||
| 2458 | RM | Gsp1DORF12470P (65% identity) | GspKTR9ORF2458P | |
| 2459 | Superfamily II DNA/RNA helicase, SNF2 family | |||
| 2459 | Superfamily II DNA/RNA helicase, SNF2 family | |||
| 2460 | M | M.Gsp1DORF12480P (78% identity) | M.GspKTR9ORF2460P | |
| 2461 | restriction endonuclease | |||
| 2874 | helix-turn-helix domain-containing protein | |||
| ??? | M | M.GteJH63ORF12660P (96% identity) | M.GspKTR9ORF2875P | |
| 2877 | 222 aa hypothetical protein | |||
| plasmid pGKT1 | ||||
| 4972 | 80 aa hypothetical protein | |||
| 4973 | R | Rho9425ORF18220P (87% identity) | GspKTR9ORF4974P | |
| 4974 | M | M.MspNx66ORF537P (59% identity) | GAATTC | M.GspKTR9ORF4974P |
| 4975 | 203 aa hypothetical protein | |||
| plasmid pGKT3 | ||||
| 5337 | 235 aa hypothetical protein | |||
| 5338 | M | M.GteJH63ORF23425P (97% identity) | M.GspKTR9ORF5338P | |
| 5339 | 134 aa hypothetical protein | |||
| 5360 | 381 aa hypothetical protein | |||
| 5361 | RM | GbrORF4906P (98% identity) | GspKTR9ORF5361P | |
| 5362 | 183 aa hypothetical protein | |||