Salmonella enterica subsp. enterica serovar Newport CVM 37978 |
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Putative Salmonella enterica subsp. enterica serovar Newport CVM 37978 RM systems
Ref: Cao,G. et al. unpublished
REBASE ref # 14906
GenBank #: AHUC00000000
REBASE acronym: Sen37978
Org_num: 9305
All begin SEEN978_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 15300 | endoribonuclease SymE | |||
| 15305 | S | S.SenS3ORF11567P (100% identity) | GACNNNNNNNRTCC | S.Sen37978ORF15310P |
| 15310 | M | M.SenS3ORF11567P (100% identity) | GACNNNNNNNRTCC | M.Sen37978ORF15310P |
| 15315 | R | Spy5740IP (100% identity) | GACNNNNNNNRTCC | Sen37978ORF15310P |
| 15320 | 322 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9214 | translational regulator | |||
| 9219 | M | M.Sen24590ORF4615P (96% identity) | M.Sen37978ORF9219P | |
| 9224 | 38 aa hypothetical protein | |||
| 17691 | 306 aa hypothetical protein | |||
| 17696 | V | V.StyTDcmP (100% identity) | V.Sen37978DcmP | |
| 17701 | M | M.Sens29927DcmP (100% identity) | CCWGG | M.Sen37978DcmP |
| 17706 | 231 aa hypothetical protein | |||
| 4680 | C4-type zinc finger protein, DksA/TraR family | |||
| 4685 | M | M.Sen943ORFEP (88% identity) | GATC | M.Sen37978ORF4685P |
| 4690 | 809 aa hypothetical protein | |||
| 5042 | periplasmic protein | |||
| 5047 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen37978ORF5047P |
| 5052 | DNA-binding protein Fis | |||
| 10288 | 73 aa hypothetical protein | |||
| 10293 | M | M.Sens8810ORF24625P (99% identity) | M.Sen37978ORF10293P | |
| 10298 | cytoplasmic protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 21665 | major facilitator superfamily MFS_1 | |||
| 21670 | M | M.SenZYXORFDP (100% identity) | CAGAG | M.Sen37978ORF21670P |
| 21675 | R | Ssp6947IIP (99% identity) | CAGAG | Sen37978ORF21670P |
| 21680 | 33 aa hypothetical protein | |||