Ref: Swingley,W.D. et al. Proc. Natl. Acad. Sci. U.S.A. (2008) In press

REBASE ref # 10343

Sequence length:GenBank #:
Chromosome: 6,503,724 bp CP000828 (NC_009925)
plasmid pREB1: 374,161 bp CP000838 (NC_009926)
plasmid pREB3: 273,121 bp CP000840 (NC_009928)

REBASE acronym: AmaM

Org_num: 4880

 

All begin AM1_, AM1_A, AM1_C

Type I
ORF Gene Most similar Specificity Name
 
Chromosome
 
673 64 aa hypothetical protein
672 R Ama10699ORF34650P (95% identity) AmaMORF679P
674 157 aa conserved hypothetical protein
675 53 aa hypothetical protein
676 433 aa hypothetical protein
677 conserved domain protein
678 S S.Ama10699ORF34650P (100% identity) S.AmaMORF679P
679 M M.Ama10699ORF34650P (76% identity) M.AmaMORF679P
681 transposase
 
681 transposase
680 M type I restriction-modification system, M M.AmaMORF680P
682 57 aa hypothetical protein
 
2231 375 aa conserved hypothetical protein
2233 S S.Ama10699ORF48610P (100% identity) S.AmaMORF2236P
2234 143 aa conserved hypothetical protein
2235 161 aa hypothetical protein
2236 M M.Ama10699ORF48610P (99% identity) M.AmaMORF2236P
2237 R Ama10699ORF48610P (100% identity) AmaMORF2236P
2239 glycosyl transferase, group 1, putative
 
4776 255 aa hypothetical protein
4777 R type I restriction enzyme R protein, putative AmaMORF4786P
4778 addiction module toxin, RelE/StbE family,
4779 86 aa hypothetical protein
4780 183 aa conserved hypothetical protein
??? S S.Ama10699ORF15160P (100% identity) S.AmaMORF4786P
4784 43 aa hypothetical protein
4783 FdxN element excision controlling factor
4785 FdxN element excision controlling factor
4786 M M.Ama10699ORF15160P (99% identity) M.AmaMORF4786P
4787 69 aa hypothetical protein
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
407 lipopolysaccharide biosynthesis protein,
408 M M.Ama10699ORF32210P (94% identity) M.AmaMORF408P
409 orotate phosphoribosyltransferase
 
728 oxidoreductase, short chain
729 M M.Ama10699ORF35100P (100% identity) CGATCG M.AmaMORF729P
730 cation diffusion facilitator (CDF) family
 
2409 51 aa hypothetical protein
2410 M M.Ama10699ORF50220P (100% identity) M.AmaMORF2410P
2411 680 aa conserved hypothetical protein
 
2582 75 aa hypothetical protein
2583 M M.Ama10699ORF51900P (100% identity) CCGCGG M.AmaMORF2583P
2584 R Ama10699ORF51900P (93% identity) CCGCGG AmaMORF2583P
2585 303 aa hypothetical protein
 
3078 44 aa hypothetical protein
3079 M M.Ama10699ORF56450P (100% identity) GATC M.AmaMDamP
3080 conserved domain protein
 
5872 100 aa conserved hypothetical protein
5873 M M.Ama10699ORF24330P (100% identity) TGGCCA M.AmaMORF5873P
5874 83 aa conserved hypothetical protein
 
plasmid pREB1
 
16 625 aa hypothetical protein
17 M M.Lsp7376ORF1501P (69% identity) M.AmaMORF17P
18 sensor histidine kinase, putative
 
328 176 aa hypothetical protein
329 M M.Ama10699ORF63660P (96% identity) CGATCG M.AmaMORF329P
330 73 aa hypothetical protein
 
plasmid pREB3
 
299 phage protein Gp37/Gp68
300 M M.AspMBORF29425P (74% identity) GATC M.AmaMORF300P
302 53 aa hypothetical protein